RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SPRED2Q7Z698 418 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 MSRB3Q8IXL7 192 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 SAMD14Q8IZD0 417 aaPredicted RBP10.45□□□□□ -0.74
COL27A1-204ENST00000477421 GJD3Q8N144 294 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 NATD1Q8N6N6 113 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 POMGNT2Q8NAT1 580 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 TBC1D15Q8TC07 691 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 ADAMTS19Q8TE59 1207 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 NCSTNQ92542 709 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 TPSD1Q9BZJ3 242 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 SPNS1Q9H2V7 528 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 SLC23A2Q9UGH3 650 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 ZNF221Q9UK13 617 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 MAN2B2Q9Y2E5 1009 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 IQCMA0A1B0GVH7 501 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 C1orf226A1L170 272 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 BLOC1S5-TXNDC5H3BN57 136 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 KHNYNO15037 678 aaKnown RBP10.44□□□□□ -0.74
COL27A1-204ENST00000477421 JRKO75564 520 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 GKN3PP0CG01 181 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 ITIH1P19827 911 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 CD22P20273 847 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 GSTM3P21266 225 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 C5AR1P21730 350 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 SLC19A1P41440 591 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 TOMM20Q15388 145 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 FAM83HQ6ZRV2 1179 aaPredicted RBP10.44□□□□□ -0.74
COL27A1-204ENST00000477421 OR56A3Q8NH54 315 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 RLN3Q8WXF3 142 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 MRPL48Q96GC5 212 aaKnown RBP10.44□□□□□ -0.74
COL27A1-204ENST00000477421 WDR92Q96MX6 357 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 LYSMD1Q96S90 227 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 MYNNQ9NPC7 610 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 MBNL1Q9NR56 388 aaKnown RBP10.44□□□□□ -0.74
COL27A1-204ENST00000477421 PCDHGA10Q9Y5H3 936 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 TCRBV21S2A2A0A5A6 115 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 SLC5A10A0PJK1 596 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 FUOMA2VDF0 154 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 CTDSP2O14595 271 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 DCKP27707 260 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 NKX3-2P78367 333 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 CD83Q01151 205 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 CBLBQ13191 982 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 C18orf63Q68DL7 685 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 NRROSQ86YC3 692 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 METTL4Q8N3J2 472 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 OR5M3Q8NGP4 307 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 GGHQ92820 318 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 SLC25A36Q96CQ1 311 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 GPR174Q9BXC1 333 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 OR8D2Q9GZM6 311 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 NKX2-4Q9H2Z4 354 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 NECTIN3Q9NQS3 549 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 SNX11Q9Y5W9 270 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 ANKRD33BA6NCL7 494 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 WWP2O00308 870 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 GAPDHSO14556 408 aaPredicted RBP10.44□□□□□ -0.74
COL27A1-204ENST00000477421 EMC8O43402 210 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 CHMP24386 653 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 PRDX1Q06830 199 aaKnown RBP10.44□□□□□ -0.74
COL27A1-204ENST00000477421 KEAP1Q14145 624 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 PIGKQ92643 395 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 WACQ9BTA9 647 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 SLITRK2Q9H156 845 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 MRPL39Q9NYK5 338 aaKnown RBP10.44□□□□□ -0.74
COL27A1-204ENST00000477421 HCN3Q9P1Z3 774 aa10.44□□□□□ -0.74
COL27A1-204ENST00000477421 A0A1B0GVT2 93 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 RHPN2P1A8MT19 583 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 PLPP1O14494 284 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 SSNA1O43805 119 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 PTHP01270 115 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 HMGN1P05114 100 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 IGFBP1P08833 259 aaPredicted RBP10.43□□□□□ -0.74
COL27A1-204ENST00000477421 TFPIP10646 304 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 OSMP13725 252 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 SSTR4P31391 388 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 BMP8BP34820 402 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 LGALS3BPQ08380 585 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 GPR19Q15760 415 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 CCBE1Q6UXH8 406 aaPredicted RBP10.43□□□□□ -0.74
COL27A1-204ENST00000477421 FAM220AQ7Z4H9 259 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 BMP8AQ7Z5Y6 402 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 C10orf111Q8N326 155 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 KLHL36Q8N4N3 616 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 DENND6BQ8NEG7 585 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 BEX1Q9HBH7 125 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 PIAS3Q9Y6X2 628 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 SPTBN2O15020 2390 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 PCM1Q15154 2024 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 CD8B2A6NJW9 211 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 AKAP8O43823 692 aaKnown RBP10.43□□□□□ -0.74
COL27A1-204ENST00000477421 ZNF888P0CJ79 500 aaPredicted RBP10.43□□□□□ -0.74
COL27A1-204ENST00000477421 CD8BP10966 210 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 ACVR1BP36896 505 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 NAA10P41227 235 aaPredicted RBP10.43□□□□□ -0.74
COL27A1-204ENST00000477421 ZNF77Q15935 545 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 LCTLQ6UWM7 567 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 SPATC1Q76KD6 591 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 ENTHD1Q8IYW4 607 aa10.43□□□□□ -0.74
COL27A1-204ENST00000477421 SUN3Q8TAQ9 357 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms