RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SPRTNQ9H040 489 aaPredicted RBP6.59□□□□□ -1.35
SHQ1-207ENST00000475558 KLHL25Q9H0H3 589 aa6.59□□□□□ -1.35
SHQ1-207ENST00000475558 TMEM38AQ9H6F2 299 aa6.59□□□□□ -1.35
SHQ1-207ENST00000475558 EVA1AQ9H8M9 152 aa6.59□□□□□ -1.35
SHQ1-207ENST00000475558 IL1RL2Q9HB29 575 aa6.59□□□□□ -1.35
SHQ1-207ENST00000475558 HHATLQ9HCP6 504 aa6.59□□□□□ -1.35
SHQ1-207ENST00000475558 PRTFDC1Q9NRG1 225 aa6.59□□□□□ -1.35
SHQ1-207ENST00000475558 VAPAQ9P0L0 249 aa6.59□□□□□ -1.35
SHQ1-207ENST00000475558 KLHL3Q9UH77 587 aa6.59□□□□□ -1.35
SHQ1-207ENST00000475558 NXT1Q9UKK6 140 aaKnown RBP6.59□□□□□ -1.35
SHQ1-207ENST00000475558 EXO1Q9UQ84 846 aaKnown RBP6.59□□□□□ -1.35
SHQ1-207ENST00000475558 LIPT1Q9Y234 373 aa6.59□□□□□ -1.35
SHQ1-207ENST00000475558 LOXL2Q9Y4K0 774 aa6.59□□□□□ -1.35
SHQ1-207ENST00000475558 SNX13Q9Y5W8 968 aa6.59□□□□□ -1.35
SHQ1-207ENST00000475558 SPTBN1Q01082 2364 aaKnown RBP6.58□□□□□ -1.36
SHQ1-207ENST00000475558 PRORSD1PA6NEY8 169 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 A8MU76 341 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 FAM220BPB1ANY3 271 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.58□□□□□ -1.36
SHQ1-207ENST00000475558 H3BMH7 237 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 SGK494L7N484 410 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 P2RX6O15547 441 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 FOXS1O43638 330 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 ASNA1O43681 348 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 PLOD3O60568 738 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 PRAMEF10O60809 474 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 COQ9O75208 318 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 ERAL1O75616 437 aaKnown RBP6.58□□□□□ -1.36
SHQ1-207ENST00000475558 PDE9AO76083 593 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 AIFM1O95831 613 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 AK1P00568 194 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 IGHEP01854 428 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 GPIP06744 558 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 GUSBP08236 651 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 FCGR1AP12314 374 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 BMP2P12643 396 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 CPMP14384 443 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 ITIH1P19827 911 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 CERS1P27544 350 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 RORAP35398 523 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 NCBP2P52298 156 aaKnown RBP eCLIP6.58□□□□□ -1.36
SHQ1-207ENST00000475558 PPP1CAP62136 330 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 HBA1P69905 142 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 MC1RQ01726 317 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 MAP4K2Q12851 820 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 CEACAM7Q14002 265 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 DCAF12Q5T6F0 453 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 PHF19Q5T6S3 580 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 LCN8Q6JVE9 175 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 BORAQ6PGQ7 559 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 QSOX2Q6ZRP7 698 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 TTLL10Q6ZVT0 673 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 C6orf120Q7Z4R8 191 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 VASH2Q86V25 355 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 HPS6Q86YV9 775 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 SLITRK4Q8IW52 837 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 CCDC116Q8IYX3 515 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 C11orf65Q8NCR3 313 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 OR7G1Q8NGA0 311 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 OR10A6Q8NH74 314 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 PRR7Q8TB68 274 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 ZCCHC10Q8TBK6 192 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 ZNF675Q8TD23 568 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 ZFP90Q8TF47 636 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 OIT3Q8WWZ8 545 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 LZICQ8WZA0 190 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 DAZLQ92904 295 aaKnown RBP6.58□□□□□ -1.36
SHQ1-207ENST00000475558 CCDC74BQ96LY2 380 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 NSMCE2Q96MF7 247 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 ZNF681Q96N22 645 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 ZNF583Q96ND8 569 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 OR6C1Q96RD1 312 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 TAAR9Q96RI9 348 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 MACROD1Q9BQ69 325 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 SLC35A5Q9BS91 424 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 SORBS1Q9BX66 1292 aaKnown RBP6.58□□□□□ -1.36
SHQ1-207ENST00000475558 VCX3BQ9H321 246 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 DENND2DQ9H6A0 471 aaPredicted RBP6.58□□□□□ -1.36
SHQ1-207ENST00000475558 CACYBPQ9HB71 228 aaKnown RBP6.58□□□□□ -1.36
SHQ1-207ENST00000475558 C8orf4Q9NR00 106 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 EXD2Q9NVH0 621 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 C14orf105Q9NVL8 296 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 CMTM6Q9NX76 183 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 PRODH2Q9UF12 536 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 NDOR1Q9UHB4 597 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 TUBD1Q9UJT1 453 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 ANAPC2Q9UJX6 822 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 RPS6KA6Q9UK32 745 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 MRTO4Q9UKD2 239 aaKnown RBP6.58□□□□□ -1.36
SHQ1-207ENST00000475558 FAF1Q9UNN5 650 aaPredicted RBP6.58□□□□□ -1.36
SHQ1-207ENST00000475558 SAMD4AQ9UPU9 718 aaKnown RBP6.58□□□□□ -1.36
SHQ1-207ENST00000475558 TEX15Q9BXT5 2789 aa6.58□□□□□ -1.36
SHQ1-207ENST00000475558 USP9YO00507 2555 aaPredicted RBP6.58□□□□□ -1.36
SHQ1-207ENST00000475558 CREBBPQ92793 2442 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 IGLV3-12A0A075B6K2 115 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 A0A0A6YYC8 382 aaPredicted RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 CLEC18AA5D8T8 446 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ASPDHA6ND91 283 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 C9orf172C9J069 976 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 C5orf58C9J3I9 102 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms