RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 GPC1P35052 558 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 FOLR3P41439 243 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 TRPC1P48995 793 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 PSME3P61289 254 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 RPS26P62854 115 aaKnown RBP8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 SERTAD2Q14140 314 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 ZNF267Q14586 743 aaPredicted RBP8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 ELAVL1Q15717 326 aaKnown RBP8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 NSDHLQ15738 373 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 LACTB2Q53H82 288 aaPredicted RBP8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 RUNDC3AQ59EK9 446 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 COX20Q5RI15 118 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 ATP1A1-AS1Q5TC04 95 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 SAXO2Q658L1 398 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 TMEM64Q6YI46 380 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 CCDC121Q6ZUS5 278 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 OR2L13Q8N349 312 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 VWA5B2Q8N398 1253 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 KIF2BQ8N4N8 673 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 NATD1Q8N6N6 113 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 ZFP28Q8NHY6 868 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 ZFP90Q8TF47 636 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 TMEM125Q96AQ2 219 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 GIMAP5Q96F15 307 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 OTUB1Q96FW1 271 aaPredicted RBP8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 MAGED4Q96JG8 741 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 SLC35A5Q9BS91 424 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 EFCAB1Q9HAE3 211 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 CXorf21Q9HAI6 301 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 NEUROD4Q9HD90 331 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 PNO1Q9NRX1 252 aaKnown RBP8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 CMTM6Q9NX76 183 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 ZNF223Q9UK11 482 aaPredicted RBP8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 NXT1Q9UKK6 140 aaKnown RBP8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 PSME2Q9UL46 239 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 VPS4AQ9UN37 437 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 ERVK-19Q9WJR5 959 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 FARSAQ9Y285 508 aaKnown RBP8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 DTX4Q9Y2E6 619 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 SNX8Q9Y5X2 465 aa8.36□□□□□ -1.07
NUDCD3-204ENST00000464812 LOC102723996A0A087X1L8 192 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 A0A1W2PQ72 361 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 SAGE2PA6NJ88 616 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 C17orf105B2RV13 164 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 C21orf140B9A014 251 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 PLOD2O00469 737 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 ERN1O75460 977 aaKnown RBP8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 ANP32DO95626 131 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 IGKV3-11P04433 115 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 CELA2AP08217 269 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 CYC1P08574 325 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 DDX5P17844 614 aaKnown RBP8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 UQCRC2P22695 453 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 OTX2P32243 289 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 CCT3P49368 545 aaKnown RBP8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 PGDP52209 483 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 SLC7A2P52569 658 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 OR4D2P58180 307 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 MXRA7P84157 204 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 FUT7Q11130 342 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 MAP4K2Q12851 820 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 TP53BP2Q13625 1128 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 EXOSC6Q5RKV6 272 aaKnown RBP8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 NANOGP8Q6NSW7 305 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 KIRREL2Q6UWL6 708 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 ZNF621Q6ZSS3 439 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 ASRGL1Q7L266 308 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 SZRD1Q7Z422 152 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 CPEB2Q7Z5Q1 589 aaKnown RBP8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 WDR53Q7Z5U6 358 aaPredicted RBP8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 RNF130Q86XS8 419 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 GALNT12Q8IXK2 581 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 SLC15A3Q8IY34 581 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 SAMD14Q8IZD0 417 aaPredicted RBP8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 DEFB107AQ8IZN7 70 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 PGAM4Q8N0Y7 254 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 IL22RA1Q8N6P7 574 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 ZNF615Q8N8J6 731 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 ZSCAN1Q8NBB4 408 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 PCYOX1LQ8NBM8 494 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 ZNF248Q8NDW4 579 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 NFAM1Q8NET5 270 aaPredicted RBP8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 VPS37AQ8NEZ2 397 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 OR11G2Q8NGC1 345 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 FBXO30Q8TB52 745 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 SLC2A12Q8TD20 617 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 SFXN5Q8TD22 340 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 ADAMTS17Q8TE56 1095 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 ZNF721Q8TF20 911 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 SNRNP27Q8WVK2 155 aaKnown RBP8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 RIT1Q92963 219 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 ROPN1LQ96C74 230 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 C16orf58Q96GQ5 468 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 CLPTM1LQ96KA5 538 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 ANKRD27Q96NW4 1050 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 CNPPD1Q9BV87 410 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 NUDT9Q9BW91 350 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 LRMDAQ9H2I8 198 aa8.35□□□□□ -1.07
NUDCD3-204ENST00000464812 NANOGQ9H9S0 305 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms