RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 CAPN14A8MX76 684 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 PDE9AO76083 593 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 FBXO45P0C2W1 286 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 LINC00032P0C843 101 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 DDCP20711 480 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 CNR1P21554 472 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 NTSP30990 170 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 PTGS2P35354 604 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 SERPINB5P36952 375 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 SERPINB4P48594 390 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 DNASE1L1P49184 302 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 SMSP52788 366 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 RPL38P63173 70 aaKnown RBP14.18□□□□□ -0.14
VARS-219ENST00000461328 MRPS35P82673 323 aaKnown RBP14.18□□□□□ -0.14
VARS-219ENST00000461328 MAP4K2Q12851 820 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 ART3Q13508 389 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 ZNF791Q3KP31 576 aaPredicted RBP14.18□□□□□ -0.14
VARS-219ENST00000461328 GALNTL6Q49A17 601 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 CMPK2Q5EBM0 449 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 PRAMEF20Q5VT98 475 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 PAOXQ6QHF9 649 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 TMEM64Q6YI46 380 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 RGS9BPQ6ZS82 235 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 FGD2Q7Z6J4 655 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 SLC22A16Q86VW1 577 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 TICAM1Q8IUC6 712 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 NUDCD3Q8IVD9 361 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 CHERPQ8IWX8 916 aaKnown RBP14.18□□□□□ -0.14
VARS-219ENST00000461328 HOMEZQ8IX15 550 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 CCDC116Q8IYX3 515 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 FAM9CQ8IZT9 166 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 ZNF615Q8N8J6 731 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 OR10G3Q8NGC4 313 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 OR52N2Q8NGI0 321 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 OR9A2Q8NGT5 310 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 C11orf24Q96F05 449 aaPredicted RBP14.18□□□□□ -0.14
VARS-219ENST00000461328 ZNF681Q96N22 645 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 ITPAQ9BY32 194 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 DEFB127Q9H1M4 99 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 MYNNQ9NPC7 610 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 SLC35C2Q9NQQ7 365 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 EHD3Q9NZN3 535 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 PRODH2Q9UF12 536 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 TRAF6Q9Y4K3 522 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 MYO7BQ6PIF6 2116 aa14.18□□□□□ -0.14
VARS-219ENST00000461328 TP53I11O14683 189 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 PIP5K1BO14986 540 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 LRATO95237 230 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 HSPA4LO95757 839 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 TPOP07202 933 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 GPX3P22352 226 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 MPIP34949 423 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 PIGAP37287 484 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 KCNJ2P63252 427 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 ADORA2A-AS1P86434 159 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 RPS6KA2Q15349 733 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 TRMT12Q53H54 448 aaKnown RBP14.17□□□□□ -0.14
VARS-219ENST00000461328 SLC22A10Q63ZE4 541 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 ARHGAP11AQ6P4F7 1023 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 XKRXQ6PP77 449 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 LYPD8Q6UX82 237 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 LRIG3Q6UXM1 1119 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 C3P1Q6ZMU1 363 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 IKBIPQ70UQ0 350 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 EXOC3L1Q86VI1 746 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 DOLPP1Q86YN1 238 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 PRR22Q8IZ63 422 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 CLYBLQ8N0X4 340 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 SLC34A3Q8N130 599 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 EID3Q8N140 333 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 ZNF441Q8N8Z8 693 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 FAM57AQ8TBR7 257 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 KAT2AQ92830 837 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 TP53INP1Q96A56 240 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 METTL2AQ96IZ6 378 aaKnown RBP14.17□□□□□ -0.14
VARS-219ENST00000461328 TTTY12Q9BZ98 90 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 STMN4Q9H169 189 aaPredicted RBP14.17□□□□□ -0.14
VARS-219ENST00000461328 SSU72Q9NP77 194 aaKnown RBP14.17□□□□□ -0.14
VARS-219ENST00000461328 RYDENQ9NUL5 291 aaKnown RBP14.17□□□□□ -0.14
VARS-219ENST00000461328 DTX4Q9Y2E6 619 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 DNAJC15Q9Y5T4 150 aa14.17□□□□□ -0.14
VARS-219ENST00000461328 KLF2Q9Y5W3 355 aaPredicted RBP14.17□□□□□ -0.14
VARS-219ENST00000461328 TM9SF1O15321 606 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 SKAP2O75563 359 aaPredicted RBP14.16□□□□□ -0.14
VARS-219ENST00000461328 CBX7O95931 251 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 S1PR1P21453 382 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 PRPH2P23942 346 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 ETV4P43268 484 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 NCBP2P52298 156 aaKnown RBP eCLIP14.16□□□□□ -0.14
VARS-219ENST00000461328 FBXW4P57775 412 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 MGAT2Q10469 447 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 CHI3L2Q15782 390 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 ZNF628Q5EBL2 1059 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 SP5Q6BEB4 398 aaPredicted RBP14.16□□□□□ -0.14
VARS-219ENST00000461328 FAM71E1Q6IPT2 247 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 RNF165Q6ZSG1 346 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 CD163Q86VB7 1156 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 FBXW8Q8N3Y1 598 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 C17orf47Q8NEP4 570 aa14.16□□□□□ -0.14
VARS-219ENST00000461328 OR2T11Q8NH01 316 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms