RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 RHBDD2Q6NTF9 364 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 TLDC1Q6P9B6 456 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 FAM198BQ6UWH4 519 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 CEACAM20Q6UY09 585 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 NPSR1Q6W5P4 371 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 TMEM179BQ7Z7N9 219 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 TSPYL5Q86VY4 417 aaPredicted RBP8.15□□□□□ -1.1
RIF1-208ENST00000457745 SLC44A2Q8IWA5 706 aaPredicted RBP8.15□□□□□ -1.1
RIF1-208ENST00000457745 SLC16A11Q8NCK7 471 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 VPS37AQ8NEZ2 397 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 NUP43Q8NFH3 380 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 OR4D11Q8NGI4 311 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 SFXN5Q8TD22 340 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 SLC38A5Q8WUX1 472 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 NCLNQ969V3 563 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 ZG16BQ96DA0 208 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 RSRC1Q96IZ7 334 aaKnown RBP8.15□□□□□ -1.1
RIF1-208ENST00000457745 NSMCE2Q96MF7 247 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 OR7D2Q96RA2 312 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 SEPHS2Q99611 448 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 BARD1Q99728 777 aaKnown RBP8.15□□□□□ -1.1
RIF1-208ENST00000457745 YIPF2Q9BWQ6 316 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 ALOXE3Q9BYJ1 711 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 VN1R1Q9GZP7 353 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 QRSL1Q9H0R6 528 aaKnown RBP8.15□□□□□ -1.1
RIF1-208ENST00000457745 SEMA6AQ9H2E6 1030 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 ZNF304Q9HCX3 659 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 ADAP2Q9NPF8 381 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 NTMQ9P121 344 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 STX18Q9P2W9 335 aaKnown RBP8.15□□□□□ -1.1
RIF1-208ENST00000457745 TRPC4Q9UBN4 977 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 MAGEL2Q9UJ55 1249 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 RARRES3Q9UL19 164 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 CLCA2Q9UQC9 943 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 CHST2Q9Y4C5 530 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 MAGED1Q9Y5V3 778 aaPredicted RBP8.15□□□□□ -1.1
RIF1-208ENST00000457745 B3GALT1Q9Y5Z6 326 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 ZNF780BQ9Y6R6 833 aa8.15□□□□□ -1.1
RIF1-208ENST00000457745 WDR87Q6ZQQ6 2873 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 PTPRBP23467 1997 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 IGLV3-12A0A075B6K2 115 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 NPIPA5A0A0B4J1W7 369 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 AQP12BA6NM10 295 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 EVPLLA8MZ36 301 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 NPIPA7E9PJI5 369 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 PLOD2O00469 737 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 GSTA4O15217 222 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 EMC8O43402 210 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 SEMA7AO75326 666 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 GUCY1B2O75343 617 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 CSO75390 466 aaKnown RBP8.14□□□□□ -1.11
RIF1-208ENST00000457745 RFPL3O75679 317 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 DKK1O94907 266 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 DIRAS1O95057 198 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 NTN1O95631 604 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 DDAH2O95865 285 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 IGKV1D-16P01601 117 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 LMNAP02545 664 aaKnown RBP8.14□□□□□ -1.11
RIF1-208ENST00000457745 SLC35E2P0CK97 266 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 NPIPA8P0DM63 369 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 ZNF10P21506 573 aaPredicted RBP8.14□□□□□ -1.11
RIF1-208ENST00000457745 MATN1P21941 496 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 SLC7A1P30825 629 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 CCKBRP32239 447 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 KDELR2P33947 212 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 IST1P53990 364 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 VLDLRP98155 873 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 CDK6Q00534 326 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 MC2RQ01718 297 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 ACY1Q03154 408 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 PPP1R8Q12972 351 aaKnown RBP8.14□□□□□ -1.11
RIF1-208ENST00000457745 SLC13A2Q13183 592 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 SCARB2Q14108 478 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 ZNF267Q14586 743 aaPredicted RBP8.14□□□□□ -1.11
RIF1-208ENST00000457745 NNATQ16517 81 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 ISXQ2M1V0 245 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 SPATS1Q496A3 300 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 NKAIN1Q4KMZ8 207 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 SFT2D3Q587I9 215 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 MTX3Q5HYI7 312 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 AAGABQ6PD74 315 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 TBPL2Q6SJ96 375 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 RBM44Q6ZP01 1051 aaKnown RBP8.14□□□□□ -1.11
RIF1-208ENST00000457745 TIPARPQ7Z3E1 657 aaKnown RBP8.14□□□□□ -1.11
RIF1-208ENST00000457745 TMEM126BQ8IUX1 230 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 LACC1Q8IV20 430 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 AQP12AQ8IXF9 295 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 GPR135Q8IZ08 494 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 PQLC1Q8N2U9 271 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 PAPD5Q8NDF8 572 aaKnown RBP8.14□□□□□ -1.11
RIF1-208ENST00000457745 OR4N2Q8NGD1 307 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 OR52R1Q8NGF1 315 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 ZFP28Q8NHY6 868 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 MIPOL1Q8TD10 442 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 ZNF675Q8TD23 568 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 PTPMT1Q8WUK0 201 aaPredicted RBP8.14□□□□□ -1.11
RIF1-208ENST00000457745 APOBEC4Q8WW27 367 aaKnown RBP8.14□□□□□ -1.11
RIF1-208ENST00000457745 PIK3R3Q92569 461 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 JADE3Q92613 823 aa8.14□□□□□ -1.11
RIF1-208ENST00000457745 HOXB13Q92826 284 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms