RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 BBS4Q96RK4 519 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 IL4I1Q96RQ9 567 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 WFDC6Q9BQY6 131 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 SLC30A2Q9BRI3 323 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 ASPNQ9BXN1 380 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 NUAK2Q9H093 628 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 RNF167Q9H6Y7 350 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 KIR3DX1Q9H7L2 352 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 SYNDIG1Q9H7V2 258 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 SMURF1Q9HCE7 757 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 SLC6A20Q9NP91 592 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 MBNL1Q9NR56 388 aaKnown RBP11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 LYARQ9NX58 379 aaKnown RBP11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 PRKAG2Q9UGJ0 569 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 ZNF229Q9UJW7 825 aa11.8□□□□□ -0.52
ECHDC1-209ENST00000454591 NINQ8N4C6 2090 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 MYO10Q9HD67 2058 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 PDZK1P1A8MUH7 402 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 MID1O15344 667 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 SEC14L5O43304 696 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 EMC8O43402 210 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 SH3BP5O60239 455 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 KAT7O95251 611 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 HOXC4P09017 264 aaPredicted RBP11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 HSMCR30P0CW71 290 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 F3P13726 295 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 CSNK2A2P19784 350 aaPredicted RBP11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 IFNGR2P38484 337 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 EIF2B2P49770 351 aaKnown RBP11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 NCBP2P52298 156 aaKnown RBP eCLIP11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 RAB40BQ12829 278 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 SELENBP1Q13228 472 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 TPBGQ13641 420 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 FGL2Q14314 439 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 NUMA1Q14980 2115 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 UAP1L1Q3KQV9 507 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 C2orf27AQ580R0 203 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 FBXO46Q6PJ61 603 aaPredicted RBP11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 RASSF6Q6ZTQ3 369 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 PHC2Q8IXK0 858 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 TCEANCQ8N8B7 351 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 OR9Q1Q8NGQ5 310 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 VANGL1Q8TAA9 524 aaPredicted RBP11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 ZNF681Q96N22 645 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 ZNF582Q96NG8 517 aaPredicted RBP11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 NRTNQ99748 197 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 C17orf62Q9BQA9 187 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 MCOLN1Q9GZU1 580 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 MRPS30Q9NP92 439 aaKnown RBP11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 DNAJC27Q9NZQ0 273 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 C5AR2Q9P296 337 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 ZFR2Q9UPR6 939 aaKnown RBP11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 PCDHGA4Q9Y5G9 962 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 HEBP2Q9Y5Z4 205 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 STON1Q9Y6Q2 735 aa11.79□□□□□ -0.52
ECHDC1-209ENST00000454591 A0A1W2PR48 441 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 SNTNA6NMZ2 147 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 KDM4EB2RXH2 506 aaPredicted RBP11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 C4orf51C9J302 202 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 H3BN98 237 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 PRODHO43272 600 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 SOX14O95416 240 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 CEACAM5P06731 702 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 IGFBP1P08833 259 aaPredicted RBP11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 IFI6P09912 130 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 ACP2P11117 423 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 TNFSF8P32971 234 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 GPC1P35052 558 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 RORCP51449 518 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 PRR5P85299 388 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 TSPAN31Q12999 210 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 SLC13A2Q13183 592 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 PIN1Q13526 163 aaPredicted RBP11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 GINS1Q14691 196 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 GPR19Q15760 415 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 FAM180BQ6P0A1 224 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 VITQ6UXI7 678 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 WASH2PQ6VEQ5 465 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 NUDT18Q6ZVK8 323 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 NCCRP1Q6ZVX7 275 aaPredicted RBP11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 SLC34A3Q8N130 599 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 ACOT4Q8N9L9 421 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 FAM83FQ8NEG4 500 aaPredicted RBP11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 OR2L3Q8NG85 312 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 OR52I1Q8NGK6 324 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 OR6T1Q8NGN1 323 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 TMEM163Q8TC26 289 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 DIO2Q92813 273 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 BADQ92934 168 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 UCN3Q969E3 161 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 TMCO6Q96DC7 493 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 CHFRQ96EP1 664 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 CNRIP1Q96F85 164 aaPredicted RBP11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 MSLNLQ96KJ4 702 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 JAM3Q9BX67 310 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 PRRG3Q9BZD7 231 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 BARHL1Q9BZE3 327 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 POLR2J2Q9GZM3 115 aaKnown RBP11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 SLC38A1Q9H2H9 487 aa11.78□□□□□ -0.52
ECHDC1-209ENST00000454591 MED17Q9NVC6 651 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms