RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 ANKRD28O15084 1053 aa25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 PRAMEF2O60811 474 aa25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 EMDP50402 254 aa25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 SPINK14Q6IE38 97 aa25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 RPUSD3Q6P087 351 aaKnown RBP25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 TP53INP1Q96A56 240 aa25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 ZBED6CLQ96FA7 236 aaPredicted RBP25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 GAL3ST4Q96RP7 486 aa25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 PRPF18Q99633 342 aaKnown RBP25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 ANKRA2Q9H9E1 313 aa25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 RYDENQ9NUL5 291 aaKnown RBP25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 PCDHGB6Q9Y5F9 930 aa25.9■■□□□ 1.74
SMARCC1-203ENST00000454240 A0A087WV62 115 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 NADKO95544 446 aaPredicted RBP25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 IFI6P09912 130 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 LAMP1P11279 417 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 CPTPQ5TA50 214 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 ZNF551Q7Z340 670 aaPredicted RBP25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 CAMKMTQ7Z624 323 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 SLC15A4Q8N697 577 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 NATD1Q8N6N6 113 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 HORMAD2Q8N7B1 307 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 C17orf47Q8NEP4 570 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 CEP70Q8NHQ1 597 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 ELP4Q96EB1 424 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 OR52B2Q96RD2 323 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 EPN3Q9H201 632 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 ATAD3AQ9NVI7 634 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 AIG1Q9NVV5 245 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 DTX4Q9Y2E6 619 aa25.89■■□□□ 1.74
SMARCC1-203ENST00000454240 TCP11X1B4DZS4 312 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 DIAPH2O60879 1101 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 GPX3P22352 226 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 SOX3P41225 446 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 MANFP55145 182 aaKnown RBP25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 MLC1Q15049 377 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 NXNQ6DKJ4 435 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 TMEM107Q6UX40 140 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 GPALPP1Q8IXQ4 340 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 ZFP28Q8NHY6 868 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 ASB15Q8WXK1 588 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 SCMH1Q96GD3 660 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 DPY30Q9C005 99 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 PRODH2Q9UF12 536 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 GPR45Q9Y5Y3 372 aa25.88■■□□□ 1.73
SMARCC1-203ENST00000454240 EDF1O60869 148 aaKnown RBP25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 OR6B1O95007 311 aa25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 MC3RP41968 323 aa25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 ZNF766Q5HY98 468 aa25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 HLA-DQA1Q5Y7H0 255 aa25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 OPN5Q6U736 354 aa25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 LYPD8Q6UX82 237 aa25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 PRICKLE2Q7Z3G6 844 aa25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 OR2L13Q8N349 312 aa25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 SLC22A8Q8TCC7 542 aa25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 BHLHE41Q9C0J9 482 aaPredicted RBP25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 C19orf53Q9UNZ5 99 aaPredicted RBP25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 EML6Q6ZMW3 1958 aa25.87■■□□□ 1.73
SMARCC1-203ENST00000454240 NUP214P35658 2090 aaPredicted RBP25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 TTLL8A6PVC2 850 aa25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 A8MVJ9 347 aa25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 UPK1AO00322 258 aa25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 CD46P15529 392 aa25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 IDH3AP50213 366 aa25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 NR0B1P51843 470 aaKnown RBP25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 HSPB3Q12988 150 aa25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 LSM12Q3MHD2 195 aaKnown RBP25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 IL20RBQ6UXL0 311 aa25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 CYP4Z2PQ8N1L4 340 aa25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 ITPAQ9BY32 194 aa25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 HPF1Q9NWY4 346 aa25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 EXPH5Q8NEV8 1989 aa25.86■■□□□ 1.73
SMARCC1-203ENST00000454240 A0A1W2PRB8 838 aa25.85■■□□□ 1.73
SMARCC1-203ENST00000454240 SP1P08047 785 aa25.85■■□□□ 1.73
SMARCC1-203ENST00000454240 MLLT10P55197 1068 aa25.85■■□□□ 1.73
SMARCC1-203ENST00000454240 SLC25A25Q6KCM7 469 aa25.85■■□□□ 1.73
SMARCC1-203ENST00000454240 ZNF605Q86T29 641 aa25.85■■□□□ 1.73
SMARCC1-203ENST00000454240 TESCQ96BS2 214 aa25.85■■□□□ 1.73
SMARCC1-203ENST00000454240 DUSP26Q9BV47 211 aa25.85■■□□□ 1.73
SMARCC1-203ENST00000454240 HES7Q9BYE0 225 aa25.85■■□□□ 1.73
SMARCC1-203ENST00000454240 NXF5Q9H1B4 397 aaKnown RBP25.85■■□□□ 1.73
SMARCC1-203ENST00000454240 TAS2R9Q9NYW1 312 aa25.85■■□□□ 1.73
SMARCC1-203ENST00000454240 SLC28A2O43868 658 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 SLC25A12O75746 678 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 PSMG1O95456 288 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 EFNA1P20827 205 aaPredicted RBP25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 GPC1P35052 558 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 PPICP45877 212 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 CDK9P50750 372 aaKnown RBP25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 AQP5P55064 265 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 DCAF7P61962 342 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 GUCY1A3Q02108 690 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 INPP5JQ15735 1006 aaPredicted RBP25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 ZNF791Q3KP31 576 aaPredicted RBP25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 TMEM198Q66K66 360 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 ACAD11Q709F0 780 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 MDGA2Q7Z553 956 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 TAGAPQ8N103 731 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 OR8J2Q8NGG1 315 aa25.84■■□□□ 1.73
SMARCC1-203ENST00000454240 LCORQ96JN0 433 aaPredicted RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms