RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 PHC1P78364 1004 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 SLC35A2P78381 396 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 SHC2P98077 582 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 HMGCS1Q01581 520 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TLE3Q04726 772 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF763Q0D2J5 394 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 CDK5R2Q13319 367 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 MLC1Q15049 377 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 C18orf21Q32NC0 220 aaPredicted RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TBC1D25Q3MII6 688 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 CRB2Q5IJ48 1285 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 DCAF12Q5T6F0 453 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 CPTPQ5TA50 214 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 UBE2UQ5VVX9 321 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 RNLSQ5VYX0 342 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ANKRD26P1Q6NSI1 321 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TRIM40Q6P9F5 258 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 AGTRAPQ6RW13 159 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 LCTLQ6UWM7 567 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ENPP6Q6UWR7 440 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 OOSP2Q86WS3 158 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 LINC00471Q8N535 108 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF655Q8N720 491 aaPredicted RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 SMYD1Q8NB12 490 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 SLC38A9Q8NBW4 561 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 OR52N2Q8NGI0 321 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ZFP90Q8TF47 636 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 PHF10Q8WUB8 498 aaKnown RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 CHPT1Q8WUD6 406 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 RASSF5Q8WWW0 418 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 MR1Q95460 341 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TMIGD2Q96BF3 282 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 HRASLS5Q96KN8 279 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 FAM210AQ96ND0 272 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 QRFPRQ96P65 431 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 BBC3Q96PG8 261 aaPredicted RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 PANX1Q96RD7 426 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 TIMM29Q9BSF4 260 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 DOHHQ9BU89 302 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 RBCK1Q9BYM8 510 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.49□□□□□ -1.69
EDEM3-203ENST00000439962 AMBRA1Q9C0C7 1298 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 OR52A5Q9H2C5 316 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 HMG20AQ9NP66 347 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 ASCL3Q9NQ33 180 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 FKBP14Q9NWM8 211 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 AHSPQ9NZD4 102 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 POFUT2Q9Y2G5 429 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 DLGAP4Q9Y2H0 992 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 DYRK1BQ9Y463 629 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 PCDHGA8Q9Y5G5 932 aa4.49□□□□□ -1.69
EDEM3-203ENST00000439962 CSMD2Q7Z408 3487 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 PCM1Q15154 2024 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 SH3D21A4FU49 640 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 TOR1BO14657 336 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 CDC123O75794 336 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 B3GALT4O96024 378 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 F10P00742 488 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 COX7A2P14406 83 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 F8A1P23610 371 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 CDH15P55291 814 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 UBE2IP63279 158 aaKnown RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 OLR1P78380 273 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 OCA2Q04671 838 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 CD47Q08722 323 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 ILKQ13418 452 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 TBCEQ15813 527 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 NKG7Q16617 165 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 CPSF6Q16630 551 aaKnown RBP eCLIP4.48□□□□□ -1.693e-12■■■■□ 25.4
EDEM3-203ENST00000439962 MANEAQ5SRI9 462 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 MFSD4BQ5TF39 518 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 SPESP1Q6UW49 350 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 SLCO4C1Q6ZQN7 724 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 TIPARPQ7Z3E1 657 aaKnown RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 PTOV1Q86YD1 416 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 KRTCAP2Q8N6L1 136 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 C1orf52Q8N6N3 182 aaKnown RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF248Q8NDW4 579 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 FBXO30Q8TB52 745 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 MYDGFQ969H8 173 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 YIPF6Q96EC8 236 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 SCARF2Q96GP6 870 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 ZDHHC12Q96GR4 267 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 APIPQ96GX9 242 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 REXO4Q9GZR2 422 aaKnown RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 RHBGQ9H310 441 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 IKZF5Q9H5V7 419 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 REEP4Q9H6H4 257 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 RMI1Q9H9A7 625 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 FANCEQ9HB96 536 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 FARSBQ9NSD9 589 aaKnown RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 TAC3Q9UHF0 121 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 LRP4O75096 1905 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 A0A0G2JN53 185 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 FEZF1A0PJY2 475 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 OR5K3A6NET4 321 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 OR5K4A6NMS3 321 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 ARHGEF33A8MVX0 844 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 C9JVG2 144 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 ZW10O43264 779 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms