RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 COX15Q7KZN9 410 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 FAM122BQ7Z309 247 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 KIAA0319LQ8IZA0 1049 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 ANKRD53Q8N9V6 530 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 FBXO22Q8NEZ5 403 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 OR5H6Q8NGV6 325 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF417Q8TAU3 575 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 OR1E3Q8WZA6 343 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 SLC38A3Q99624 504 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 PRODH2Q9UF12 536 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 PTPRMP28827 1452 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 C2orf78A6NCI8 922 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 SPATA31C2B4DYI2 1134 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 FTCDNL1E5RQL4 147 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 C17orf112F2Z3M2 114 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 GAPDHSO14556 408 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-209ENST00000437951 KCNK2O95069 426 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 APOA2P02652 100 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 NDUFV2P19404 249 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 TMEM31Q5JXX7 168 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 FAM162BQ5T6X4 162 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 CFAP77Q6ZQR2 320 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 RETREG3Q86VR2 466 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 B3GNT7Q8NFL0 401 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 SLC35B2Q8TB61 432 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 TTPALQ9BTX7 342 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 CCDC163A0A0D9SF12 145 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 IQCF5A8MTL0 148 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 TNFSF9P41273 254 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 FAM111BQ6SJ93 734 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 RHEBL1Q8TAI7 183 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 NIPSNAP3BQ9BS92 247 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 EMC7Q9NPA0 242 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 NOCTQ9UK39 431 aaKnown RBP11.04□□□□□ -0.64
PTCH1-209ENST00000437951 TSPAN11A1L157 253 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 SLC16A5O15375 505 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 OPN1SWP03999 348 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 HRH2P25021 359 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 CAV2P51636 162 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 IL17AQ16552 155 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF678Q5SXM1 525 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 OR5T1Q8NG75 326 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 OR4K17Q8NGC6 315 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 RNF141Q8WVD5 230 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 SNX18Q96RF0 628 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 HBEGFQ99075 208 aa11.04□□□□□ -0.64
PTCH1-209ENST00000437951 SMIM35A0A1B0GVV1 85 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 C2orf72A6NCS6 295 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 MMP20O60882 483 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
PTCH1-209ENST00000437951 DEPDC5O75140 1603 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 SMIM10L2AP0DMW4 78 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 SMIM10L2BP0DMW5 78 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF43P17038 809 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 ACTR1AP61163 376 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 TRMT10BQ6PF06 316 aaKnown RBP11.03□□□□□ -0.64
PTCH1-209ENST00000437951 KLBQ86Z14 1044 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 OR6N1Q8NGY5 312 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 OR5AK3PQ8NH89 298 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 OR5AK2Q8NH90 309 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 OR1S1Q8NH92 325 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 KCNJ9Q92806 393 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 P2RY13Q9BPV8 354 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 ARPC5LQ9BPX5 153 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 NIPAL2Q9H841 368 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 AIG1Q9NVV5 245 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 COQ4Q9Y3A0 265 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 SPATA31D1Q6ZQQ2 1576 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 PSMD8P48556 350 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 TAS2R19P59542 299 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 BRAT1Q6PJG6 821 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 UNC5DQ6UXZ4 953 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 WFIKKN2Q8TEU8 576 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 SLC5A11Q8WWX8 675 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 NUS1Q96E22 293 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 KCNIP2Q9NS61 270 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 SMOXQ9NWM0 555 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 DTLQ9NZJ0 730 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 LRP5LA4QPB2 252 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 STK17BO94768 372 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 ITGAMP11215 1152 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF30P17039 623 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 CALCRP30988 508 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 SP3Q02447 781 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 OR10K2Q6IF99 312 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 PAQR3Q6TCH7 311 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 NAA40Q86UY6 237 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 NLRP8Q86W28 1048 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 SIAH1Q8IUQ4 282 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 CFAP52Q8N1V2 620 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 LDAHQ9H6V9 325 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 CWH43Q9H720 699 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 A0A1W2PPL8 197 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 SOCS2O14508 198 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 ICMTO60725 284 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 MED6O75586 246 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 CHRNA4P43681 627 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 GIPRP48546 466 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 USP50Q70EL3 339 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF546Q86UE3 836 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms