RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CLPTM1LQ96KA5 538 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 LRFN5Q96NI6 719 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 ANKRD27Q96NW4 1050 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 TAAR9Q96RI9 348 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 CDRT15Q96T59 188 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 CGREF1Q99674 301 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 HOPXQ9BPY8 73 aaPredicted RBP6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 DDA1Q9BW61 102 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 SPRY4Q9C004 299 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 SLC7A5P2Q9GIP4 190 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 IKZF5Q9H5V7 419 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 CXorf36Q9H7Y0 433 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 NANOGQ9H9S0 305 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 SIRT3Q9NTG7 399 aaPredicted RBP6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 ACSS1Q9NUB1 689 aaPredicted RBP6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 CMTM6Q9NX76 183 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 DLL3Q9NYJ7 618 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 TAS2R9Q9NYW1 312 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 TRPC4Q9UBN4 977 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 CTSFQ9UBX1 484 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 PISDQ9UG56 409 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 PSME2Q9UL46 239 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 SF3B6Q9Y3B4 125 aaKnown RBP6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 B3GALT1Q9Y5Z6 326 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 GMEB1Q9Y692 573 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 ZNF780BQ9Y6R6 833 aa6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 ARHGEF17Q96PE2 2063 aaPredicted RBP6.59□□□□□ -1.35
LSM3P3-201ENST00000436601 IGLV3-12A0A075B6K2 115 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 IGKV3D-11A0A0A0MRZ8 115 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 TEX51A0A1B0GUA7 166 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 BLACEA4D250 179 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 FAM149AA5PLN7 773 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 VSTM2BA6NLU5 285 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 C9orf172C9J069 976 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 NME4O00746 187 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 CLDN4O14493 209 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 CNOT3O75175 753 aaKnown RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 CDC123O75794 336 aaPredicted RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 SORBS2O94875 1100 aaKnown RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 KCNK5O95279 499 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 FHP07954 510 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 ABCB1P08183 1280 aaPredicted RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 SLC35E2P0CK97 266 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 CPMP14384 443 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 DDX5P17844 614 aaKnown RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 MAOAP21397 527 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 IL10P22301 178 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 NTSP30990 170 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 MPIP34949 423 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 PGM1P36871 562 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 CDK9P50750 372 aaKnown RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 NCBP2P52298 156 aaKnown RBP eCLIP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 SLC7A2P52569 658 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 MAPK10P53779 464 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 MANFP55145 182 aaKnown RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 HSD17B7P56937 341 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 FOXL2P58012 376 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 DCDP81605 110 aaKnown RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 RHAGQ02094 409 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 MGAT2Q10469 447 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 HSPB3Q12988 150 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 SLC13A2Q13183 592 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 EIF3IQ13347 325 aaKnown RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 CEACAM7Q14002 265 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 LTB4RQ15722 352 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 DNAL1Q4LDG9 190 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 CPZQ66K79 652 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 CEACAM20Q6UY09 585 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 ZNF517Q6ZMY9 492 aaPredicted RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 DGAT2L6Q6ZPD8 337 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 OVCH1Q7RTY7 1134 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 TMPRSS12Q86WS5 348 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 SAMD14Q8IZD0 417 aaPredicted RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 C10orf111Q8N326 155 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 LRRC25Q8N386 305 aaPredicted RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 SVOPQ8N4V2 548 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 OR8J3Q8NGG0 315 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 OR9A2Q8NGT5 310 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 WDR36Q8NI36 951 aaKnown RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 ADAMTS14Q8WXS8 1223 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 PPWD1Q96BP3 646 aaKnown RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 AURKBQ96GD4 344 aaPredicted RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 OR1F2PQ96R84 312 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 BBS4Q96RK4 519 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 CPPED1Q9BRF8 314 aaPredicted RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 ZPBPQ9BS86 351 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 THTPAQ9BU02 230 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 ASPSCR1Q9BZE9 553 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 ULBP3Q9BZM4 244 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 EPS8L2Q9H6S3 715 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 SPAG4Q9NPE6 437 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 MKKSQ9NPJ1 570 aaPredicted RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 NECTIN3Q9NQS3 549 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 PRTFDC1Q9NRG1 225 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 NDE1Q9NXR1 346 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 ADA2Q9NZK5 511 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 TMEM181Q9P2C4 612 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 ABCD2Q9UBJ2 740 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 ZNF282Q9UDV7 671 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms