RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 FKBP1BP68106 108 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 BNIP1Q12981 228 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 MXD4Q14582 209 aaPredicted RBP2.43□□□□□ -2.02
CLK1-204ENST00000432425 SMU1Q2TAY7 513 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 C2orf76Q3KRA6 126 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 IQCCQ4KMZ1 466 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 FILIP1LQ4L180 1135 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 CCDC80Q76M96 950 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 VASH2Q86V25 355 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 CACUL1Q86Y37 369 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 NAXDQ8IW45 347 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 CCDC65Q8IXS2 484 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 FBXW8Q8N3Y1 598 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 GMCL1P1Q8NEA9 526 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 ANKRD20A12PQ8NF67 263 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 OR56B2PQ8NGI1 322 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 CKAP2Q8WWK9 683 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 DNASE1L2Q92874 299 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 FAM162AQ96A26 154 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 TUBGCP3Q96CW5 907 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 ZBED6CLQ96FA7 236 aaPredicted RBP2.43□□□□□ -2.02
CLK1-204ENST00000432425 ERO1AQ96HE7 468 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 LINC00167Q96N53 147 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 C17orf62Q9BQA9 187 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 TEX13AQ9BXU3 409 aaPredicted RBP2.43□□□□□ -2.02
CLK1-204ENST00000432425 NT5DC2Q9H857 520 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 TMEM165Q9HC07 324 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 TM9SF3Q9HD45 589 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 IKZF3Q9UKT9 509 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 ITGA11Q9UKX5 1188 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 BARX2Q9UMQ3 279 aaPredicted RBP2.43□□□□□ -2.02
CLK1-204ENST00000432425 EXOC6BQ9Y2D4 811 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 CAB39Q9Y376 341 aaPredicted RBP2.43□□□□□ -2.02
CLK1-204ENST00000432425 KIF3AQ9Y496 699 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 ASB3Q9Y575 518 aa2.43□□□□□ -2.02
CLK1-204ENST00000432425 KLF2Q9Y5W3 355 aaPredicted RBP2.43□□□□□ -2.02
CLK1-204ENST00000432425 FAM205AQ6ZU69 1335 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 YDJCA8MPS7 323 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 M0R296 226 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 E2F3O00716 465 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 CTDSPLO15194 276 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 RTL8CO15255 209 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 MAGEB3O15480 346 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 PEX11AO75192 247 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 SIX3O95343 332 aaPredicted RBP2.42□□□□□ -2.02
CLK1-204ENST00000432425 NPPAP01160 153 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 OPN1MWP04001 364 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 FHP07954 510 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 OPN1MW2P0DN77 364 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 OPN1MW3P0DN78 364 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 ZBTB25P24278 435 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 RDXP35241 583 aaKnown RBP2.42□□□□□ -2.02
CLK1-204ENST00000432425 TAGLN2P37802 199 aaKnown RBP2.42□□□□□ -2.02
CLK1-204ENST00000432425 CASP3P42574 277 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 IER3P46695 156 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 DHPSP49366 369 aaPredicted RBP2.42□□□□□ -2.02
CLK1-204ENST00000432425 SLC3A1Q07837 685 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 CCDC173Q0VFZ6 552 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 PTK6Q13882 451 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 RCN2Q14257 317 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 ZNF79Q15937 498 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 INAQ16352 499 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 CNPY1Q3B7I2 92 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 CCDC152Q4G0S7 254 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 SLC25A24Q6NUK1 477 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 CLEC2AQ6UVW9 174 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 PET117Q6UWS5 81 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 PAMR1Q6UXH9 720 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 ZYG11AQ6WRX3 759 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 LINC00696Q6ZRV3 163 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 CCDC71Q8IV32 467 aaPredicted RBP2.42□□□□□ -2.02
CLK1-204ENST00000432425 FAM9CQ8IZT9 166 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 SLC22A18ASQ8N1D0 253 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 C10orf53Q8N6V4 93 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 MRPL43Q8N983 215 aaKnown RBP2.42□□□□□ -2.02
CLK1-204ENST00000432425 CNNM3Q8NE01 707 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 OR52E1Q8NGJ3 308 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 FLVCR1-AS1Q8TAF5 88 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 RNASE8Q8TDE3 154 aaKnown RBP2.42□□□□□ -2.02
CLK1-204ENST00000432425 TCP11Q8WWU5 503 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 ATP6V0A1Q93050 837 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 PHYHIPLQ96FC7 376 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 SPATA13Q96N96 652 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 RANBP9Q96S59 729 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 EDEM2Q9BV94 578 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 IDI2Q9BXS1 227 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 NT5C3AQ9H0P0 336 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 CLSTN2Q9H4D0 955 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 EHD1Q9H4M9 534 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 ZNF665Q9H7R5 613 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 PDFQ9HBH1 243 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 GPR173Q9NS66 373 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 ANO10Q9NW15 660 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 NMRK1Q9NWW6 199 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 SOHLH2Q9NX45 425 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 HMG20BQ9P0W2 317 aa2.42□□□□□ -2.02
CLK1-204ENST00000432425 HOOK1Q9UJC3 728 aaKnown RBP2.42□□□□□ -2.02
CLK1-204ENST00000432425 RPH3AQ9Y2J0 694 aaPredicted RBP2.42□□□□□ -2.02
CLK1-204ENST00000432425 SPAG9O60271 1321 aaKnown RBP2.42□□□□□ -2.02
CLK1-204ENST00000432425 TTC21BQ7Z4L5 1316 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms