RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 LRRC38Q5VT99 294 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 FNDC7Q5VTL7 733 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 RAET1LQ5VY80 246 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 MRNIPQ6NTE8 343 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 CASC4Q6P4E1 433 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 TRIM40Q6P9F5 258 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 FIGNL1Q6PIW4 674 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 NXPE4Q6UWF7 544 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 MBOAT1Q6ZNC8 495 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 USP43Q70EL4 1123 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 OR4N5Q8IXE1 308 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 LRRC56Q8IYG6 542 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-203ENST00000424270 CEP112Q8N8E3 955 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 GAL3ST3Q96A11 431 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 ZBTB8AQ96BR9 441 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 CTHRC1Q96CG8 243 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 MUCL1Q96DR8 90 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 SNF8Q96H20 258 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 SNX18Q96RF0 628 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 VRK1Q99986 396 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-203ENST00000424270 DHRS9Q9BPW9 319 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 SOX7Q9BT81 388 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 ERVK-6Q9BXR3 956 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 HDHD5Q9BXW7 423 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 OR2B2Q9GZK3 357 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 BPESC1Q9GZL8 116 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 OR10A4Q9H209 315 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 CDC42EP4Q9H3Q1 356 aaKnown RBP5.64□□□□□ -1.51
SDCBP-203ENST00000424270 RNF122Q9H9V4 155 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 LPAR2Q9HBW0 351 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 GALNT9Q9HCQ5 603 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 XPR1Q9UBH6 696 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 ERVK-19Q9WJR5 959 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 GRIP1Q9Y3R0 1128 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 COMMD10Q9Y6G5 202 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 ROS1P08922 2347 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 WNK1Q9H4A3 2382 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 DPRXA6NFQ7 191 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 BTNL10A8MVZ5 291 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 EFCAB8A8MWE9 144 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 H3BML4 177 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 APOC4-APOC2K7ER74 178 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 HRKO00198 91 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 SCAMP2O15127 329 aaKnown RBP5.63□□□□□ -1.51
SDCBP-203ENST00000424270 ST8SIA5O15466 376 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 H2AFYO75367 372 aaKnown RBP5.63□□□□□ -1.51
SDCBP-203ENST00000424270 APOC2P02655 101 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 SERPING1P05155 500 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 SERPINA6P08185 405 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 NUDT17P0C025 328 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 MPC1LP0DKB6 136 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 HKR1P10072 659 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 NPPBP16860 134 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 PSMB1P20618 241 aaKnown RBP5.63□□□□□ -1.51
SDCBP-203ENST00000424270 HPDP32754 393 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-203ENST00000424270 SKIV2L2P42285 1042 aaKnown RBP5.63□□□□□ -1.51
SDCBP-203ENST00000424270 STT3AP46977 705 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 NPY2RP49146 381 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 GFRA1P56159 465 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 SLC37A1P57057 533 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 DOC2BQ14184 412 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 C6orf163Q5TEZ5 329 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 SLC30A6Q6NXT4 461 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 FAHD2BQ6P2I3 314 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-203ENST00000424270 UGT2A3Q6UWM9 527 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 C17orf107Q6ZR85 190 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 SLC46A3Q7Z3Q1 461 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 PIWIL4Q7Z3Z4 852 aaKnown RBP5.63□□□□□ -1.51
SDCBP-203ENST00000424270 STRA8Q7Z7C7 330 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 TMPRSS11BQ86T26 416 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 KLHDC8AQ8IYD2 350 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 MPP5Q8N3R9 675 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 TEX29Q8N6K0 151 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 C7orf57Q8NEG2 295 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 ACTL9Q8TC94 416 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 SLC5A11Q8WWX8 675 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 KISS1RQ969F8 398 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-203ENST00000424270 FAHD2AQ96GK7 314 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 FBXL20Q96IG2 436 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 RADILQ96JH8 1075 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 ZNF778Q96MU6 729 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 SERINC2Q96SA4 455 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 POTEKPQ9BYX7 375 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 MMP27Q9H306 513 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 PLSCR4Q9NRQ2 329 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 WWOXQ9NZC7 414 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 GALPQ9UBC7 116 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.63□□□□□ -1.51
SDCBP-203ENST00000424270 ZNF175Q9Y473 711 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 TCAF1Q9Y4C2 921 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 PPIAL4AQ9Y536 164 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 CLDN16Q9Y5I7 305 aa5.63□□□□□ -1.51
SDCBP-203ENST00000424270 hCG_1818297A0A087WSY0 165 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 CTAGE9A4FU28 777 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 OR6C76A6NM76 312 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 VWC2LB2RUY7 222 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 SHISA9B4DS77 424 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 C4orf51C9J302 202 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 GOLGA8KD6RF30 607 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 H0YC42 278 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms