RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 PIWIL2Q8TC59 973 aaKnown RBP12.17□□□□□ -0.46
HDAC8-210ENST00000412342 KAT2AQ92830 837 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 TP53INP1Q96A56 240 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 CIDECQ96AQ7 238 aaPredicted RBP12.17□□□□□ -0.46
HDAC8-210ENST00000412342 PPCDCQ96CD2 204 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 BBS4Q96RK4 519 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 GAL3ST4Q96RP7 486 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 ITPAQ9BY32 194 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 SH2D2AQ9NP31 389 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 SLCO1B3Q9NPD5 702 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 NOP53Q9NZM5 478 aaKnown RBP12.17□□□□□ -0.46
HDAC8-210ENST00000412342 FASNP49327 2511 aaKnown RBP12.17□□□□□ -0.46
HDAC8-210ENST00000412342 GCN1Q92616 2671 aaKnown RBP12.16□□□□□ -0.46
HDAC8-210ENST00000412342 A0A087WV62 115 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 C2orf92A0A1B0GVN3 265 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 ASPDHA6ND91 283 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 PLOD2O00469 737 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 PDPK1O15530 556 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 NME6O75414 186 aaPredicted RBP12.16□□□□□ -0.46
HDAC8-210ENST00000412342 SLITRK5O94991 958 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 SP1P08047 785 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 FBXO45P0C2W1 286 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 KITP10721 976 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 CD46P15529 392 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 LBPP18428 481 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 MC3RP41968 323 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 NCBP2P52298 156 aaKnown RBP eCLIP12.16□□□□□ -0.46
HDAC8-210ENST00000412342 CLDN8P56748 225 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 PMP22Q01453 160 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 MAD2L1Q13257 205 aaPredicted RBP12.16□□□□□ -0.46
HDAC8-210ENST00000412342 IGFBP7Q16270 282 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 ZNF791Q3KP31 576 aaPredicted RBP12.16□□□□□ -0.46
HDAC8-210ENST00000412342 C6orf163Q5TEZ5 329 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 RGS9BPQ6ZS82 235 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 ZNF551Q7Z340 670 aaPredicted RBP12.16□□□□□ -0.46
HDAC8-210ENST00000412342 GALNTL5Q7Z4T8 443 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 SLC15A4Q8N697 577 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 OR7A2PQ8NGA2 310 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 LRRC8CQ8TDW0 803 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 GRHL3Q8TE85 626 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 CKAP2Q8WWK9 683 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 ASB15Q8WXK1 588 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 COQ8BQ96D53 544 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 VSTM2LQ96N03 204 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 NXF5Q9H1B4 397 aaKnown RBP12.16□□□□□ -0.46
HDAC8-210ENST00000412342 ACBD3Q9H3P7 528 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 WDR55Q9H6Y2 383 aaPredicted RBP12.16□□□□□ -0.46
HDAC8-210ENST00000412342 KLHL1Q9NR64 748 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 RYDENQ9NUL5 291 aaKnown RBP12.16□□□□□ -0.46
HDAC8-210ENST00000412342 INTS9Q9NV88 658 aaKnown RBP12.16□□□□□ -0.46
HDAC8-210ENST00000412342 EIF3LQ9Y262 564 aaKnown RBP12.16□□□□□ -0.46
HDAC8-210ENST00000412342 COPG1Q9Y678 874 aaKnown RBP12.16□□□□□ -0.46
HDAC8-210ENST00000412342 RELNP78509 3460 aa12.16□□□□□ -0.46
HDAC8-210ENST00000412342 A8MVJ9 347 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 SLCO1B7G3V0H7 640 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 J3QKU1 62 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 VPS4BO75351 444 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 LAMP1P11279 417 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 EPHA3P29320 983 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 NTSP30990 170 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 HPCAL1P37235 193 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 CDK9P50750 372 aaKnown RBP12.15□□□□□ -0.46
HDAC8-210ENST00000412342 NR0B1P51843 470 aaKnown RBP12.15□□□□□ -0.46
HDAC8-210ENST00000412342 TDGF1P3P51864 188 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 SLC9B1Q4ZJI4 515 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 OPN5Q6U736 354 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 TMEM107Q6UX40 140 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 IL20RBQ6UXL0 311 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 R3HCC1LQ7Z5L2 792 aaKnown RBP12.15□□□□□ -0.46
HDAC8-210ENST00000412342 CAMKMTQ7Z624 323 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 OR2L13Q8N349 312 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 HORMAD2Q8N7B1 307 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 TMEM178AQ8NBL3 297 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 PSD4Q8NDX1 1056 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 SLC22A8Q8TCC7 542 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 SPACA9Q96E40 222 aaPredicted RBP12.15□□□□□ -0.46
HDAC8-210ENST00000412342 ELP4Q96EB1 424 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 MAGEB18Q96M61 343 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 C5orf34Q96MH7 638 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 FRMD6Q96NE9 622 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 BTBD9Q96Q07 612 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 SLX1AQ9BQ83 275 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 DEPPQ9NTK1 212 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 ACSS1Q9NUB1 689 aaPredicted RBP12.15□□□□□ -0.46
HDAC8-210ENST00000412342 HPF1Q9NWY4 346 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 SH3BP4Q9P0V3 963 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 BCAP29Q9UHQ4 241 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 C19orf53Q9UNZ5 99 aaPredicted RBP12.15□□□□□ -0.46
HDAC8-210ENST00000412342 CFL2Q9Y281 166 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 GPR55Q9Y2T6 319 aaPredicted RBP12.15□□□□□ -0.46
HDAC8-210ENST00000412342 TENM4Q6N022 2769 aa12.15□□□□□ -0.46
HDAC8-210ENST00000412342 GOLGA8QA0A0J9YX86 632 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 GOLGA8OA6NCC3 632 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 TRPC5OSA6NMA1 111 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 GOLGA8NF8WBI6 632 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 UPK1AO00322 258 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 TO15178 435 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 BCAS2O75934 225 aaPredicted RBP12.14□□□□□ -0.47
HDAC8-210ENST00000412342 RASAL1O95294 804 aa12.14□□□□□ -0.47
HDAC8-210ENST00000412342 CT45A8P0DMV1 189 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms