RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 TMEM156Q8N614 296 aa18.8■□□□□ 0.6
PTCD3-202ENST00000409326 NATD1Q8N6N6 113 aa18.8■□□□□ 0.6
PTCD3-202ENST00000409326 ZNF441Q8N8Z8 693 aa18.8■□□□□ 0.6
PTCD3-202ENST00000409326 SIMC1Q8NDZ2 872 aa18.8■□□□□ 0.6
PTCD3-202ENST00000409326 OR7G2Q8NG99 324 aa18.8■□□□□ 0.6
PTCD3-202ENST00000409326 COQ8BQ96D53 544 aa18.8■□□□□ 0.6
PTCD3-202ENST00000409326 DPY30Q9C005 99 aa18.8■□□□□ 0.6
PTCD3-202ENST00000409326 RYDENQ9NUL5 291 aaKnown RBP18.8■□□□□ 0.6
PTCD3-202ENST00000409326 EML6Q6ZMW3 1958 aa18.8■□□□□ 0.6
PTCD3-202ENST00000409326 A0A087WV62 115 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 C2orf92A0A1B0GVN3 265 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 PLOD2O00469 737 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 GPX3P22352 226 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 MC3RP41968 323 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 C19orf57Q0VDD7 668 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 HSPB3Q12988 150 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 OR1C1Q15619 314 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 LSM12Q3MHD2 195 aaKnown RBP18.79■□□□□ 0.6
PTCD3-202ENST00000409326 PIGGQ5H8A4 983 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 TMEM107Q6UX40 140 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 ACAD11Q709F0 780 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 ZNF551Q7Z340 670 aaPredicted RBP18.79■□□□□ 0.6
PTCD3-202ENST00000409326 GPALPP1Q8IXQ4 340 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 HORMAD2Q8N7B1 307 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 MDS2Q8NDY4 140 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 C17orf47Q8NEP4 570 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 SLC22A8Q8TCC7 542 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 NUDT8Q8WV74 236 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 ASB15Q8WXK1 588 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 ADIPOR1Q96A54 375 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 TP53INP1Q96A56 240 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 SIGLEC12Q96PQ1 595 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 BHLHE41Q9C0J9 482 aaPredicted RBP18.79■□□□□ 0.6
PTCD3-202ENST00000409326 ANKRA2Q9H9E1 313 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 LUZP4Q9P127 313 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 LRFN1Q9P244 771 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 PRODH2Q9UF12 536 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 DTX4Q9Y2E6 619 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 PCDHGA10Q9Y5H3 936 aa18.79■□□□□ 0.6
PTCD3-202ENST00000409326 POLR3GO15318 223 aaPredicted RBP18.78■□□□□ 0.6
PTCD3-202ENST00000409326 ZNF354AO60765 605 aaPredicted RBP18.78■□□□□ 0.6
PTCD3-202ENST00000409326 NEURL1O76050 574 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 NADKO95544 446 aaPredicted RBP18.78■□□□□ 0.6
PTCD3-202ENST00000409326 IDO1P14902 403 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 SOX3P41225 446 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 IDH3AP50213 366 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 EMDP50402 254 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 CLNS1AP54105 237 aaKnown RBP18.78■□□□□ 0.6
PTCD3-202ENST00000409326 AQP5P55064 265 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 MANFP55145 182 aaKnown RBP18.78■□□□□ 0.6
PTCD3-202ENST00000409326 GUCY1A3Q02108 690 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 MLC1Q15049 377 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 HLA-DQA1Q5Y7H0 255 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 SPINK14Q6IE38 97 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 SLC15A4Q8N697 577 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 TESCQ96BS2 214 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 ELP4Q96EB1 424 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 DUSP26Q9BV47 211 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 CCDC134Q9H6E4 229 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 TCF7L2Q9NQB0 619 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 GPR45Q9Y5Y3 372 aa18.78■□□□□ 0.6
PTCD3-202ENST00000409326 A8MVJ9 347 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 COQ9O75208 318 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 OR6B1O95007 311 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 GPC1P35052 558 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 GSTA3Q16772 222 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 TMEM198Q66K66 360 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 OPN5Q6U736 354 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 ZNF227Q86WZ6 799 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 CYP4Z2PQ8N1L4 340 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 OR2L13Q8N349 312 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 OR8J2Q8NGG1 315 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 STON2Q8WXE9 905 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 EBF4Q9BQW3 602 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 CCDC28BQ9BUN5 200 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 ITPAQ9BY32 194 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 CLMPQ9H6B4 373 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 DDX18Q9NVP1 670 aaKnown RBP18.77■□□□□ 0.6
PTCD3-202ENST00000409326 HPF1Q9NWY4 346 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 TAS2R9Q9NYW1 312 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 C19orf53Q9UNZ5 99 aaPredicted RBP18.77■□□□□ 0.6
PTCD3-202ENST00000409326 PCDHGB6Q9Y5F9 930 aa18.77■□□□□ 0.6
PTCD3-202ENST00000409326 A0A1W2PRB8 838 aa18.76■□□□□ 0.59
PTCD3-202ENST00000409326 UPK1AO00322 258 aa18.76■□□□□ 0.59
PTCD3-202ENST00000409326 UBDO15205 165 aa18.76■□□□□ 0.59
PTCD3-202ENST00000409326 SLC25A12O75746 678 aa18.76■□□□□ 0.59
PTCD3-202ENST00000409326 PSMG1O95456 288 aa18.76■□□□□ 0.59
PTCD3-202ENST00000409326 CD46P15529 392 aa18.76■□□□□ 0.59
PTCD3-202ENST00000409326 EFNA1P20827 205 aaPredicted RBP18.76■□□□□ 0.59
PTCD3-202ENST00000409326 MDH1P40925 334 aaKnown RBP18.76■□□□□ 0.59
PTCD3-202ENST00000409326 CDK9P50750 372 aaKnown RBP18.76■□□□□ 0.59
PTCD3-202ENST00000409326 NR0B1P51843 470 aaKnown RBP18.76■□□□□ 0.59
PTCD3-202ENST00000409326 DCAF7P61962 342 aa18.76■□□□□ 0.59
PTCD3-202ENST00000409326 DPY19L1Q2PZI1 675 aa18.76■□□□□ 0.59
PTCD3-202ENST00000409326 PGS1Q32NB8 556 aa18.76■□□□□ 0.59
PTCD3-202ENST00000409326 PDCD4Q53EL6 469 aaKnown RBP18.76■□□□□ 0.59
PTCD3-202ENST00000409326 ZNF766Q5HY98 468 aa18.76■□□□□ 0.59
PTCD3-202ENST00000409326 RPUSD3Q6P087 351 aaKnown RBP18.76■□□□□ 0.59
PTCD3-202ENST00000409326 LYPD8Q6UX82 237 aa18.76■□□□□ 0.59
PTCD3-202ENST00000409326 TAGAPQ8N103 731 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms