RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 LAMP1P11279 417 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 NT5EP21589 574 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 MPIP34949 423 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 KIR3DL1P43629 444 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 CEBPEQ15744 281 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 PRSS53Q2L4Q9 553 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 PRR30Q53SZ7 412 aaPredicted RBP19.29■□□□□ 0.68
C4orf48-201ENST00000409248 RPUSD3Q6P087 351 aaKnown RBP19.29■□□□□ 0.68
C4orf48-201ENST00000409248 PAOXQ6QHF9 649 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 PIGWQ7Z7B1 504 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 ZFP28Q8NHY6 868 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 THAP3Q8WTV1 239 aaPredicted RBP19.29■□□□□ 0.68
C4orf48-201ENST00000409248 RIT1Q92963 219 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 COQ8BQ96D53 544 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 ZBED6CLQ96FA7 236 aaPredicted RBP19.29■□□□□ 0.68
C4orf48-201ENST00000409248 TEX37Q96LM6 180 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 DUSP26Q9BV47 211 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 CNPPD1Q9BV87 410 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 BHLHE41Q9C0J9 482 aaPredicted RBP19.29■□□□□ 0.68
C4orf48-201ENST00000409248 TMEM45AQ9NWC5 275 aa19.29■□□□□ 0.68
C4orf48-201ENST00000409248 MYO1GB0I1T2 1018 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 ATP1B1P05026 303 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 GPX3P22352 226 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 S100A3P33764 101 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 NCBP2P52298 156 aaKnown RBP eCLIP19.28■□□□□ 0.68
C4orf48-201ENST00000409248 OR1C1Q15619 314 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 FAM180AQ6UWF9 173 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 GALNT12Q8IXK2 581 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 CCDC116Q8IYX3 515 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 CISD2Q8N5K1 135 aaKnown RBP19.28■□□□□ 0.68
C4orf48-201ENST00000409248 OR5L2Q8NGL0 311 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 ZNF721Q8TF20 911 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 CIDECQ96AQ7 238 aaPredicted RBP19.28■□□□□ 0.68
C4orf48-201ENST00000409248 PPWD1Q96BP3 646 aaKnown RBP19.28■□□□□ 0.68
C4orf48-201ENST00000409248 SNRNP40Q96DI7 357 aaKnown RBP19.28■□□□□ 0.68
C4orf48-201ENST00000409248 SENP5Q96HI0 755 aaPredicted RBP19.28■□□□□ 0.68
C4orf48-201ENST00000409248 C5orf34Q96MH7 638 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 ZNF385DQ9H6B1 395 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 AGPAT4Q9NRZ5 378 aa19.28■□□□□ 0.68
C4orf48-201ENST00000409248 FAM234BA2RU67 622 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 CCDC22O60826 627 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 ITGA10O75578 1167 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 WISP1O95388 367 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 IGKV3-11P04433 115 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 CD46P15529 392 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 IL12AP29459 219 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 TRHRP34981 398 aaPredicted RBP19.27■□□□□ 0.68
C4orf48-201ENST00000409248 CD96P40200 585 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 CYB561P49447 251 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 SSR4P51571 173 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 FAM174BQ3ZCQ3 159 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 ZNF766Q5HY98 468 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 SPANXN4Q5MJ08 99 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 GKAP1Q5VSY0 366 aaPredicted RBP19.27■□□□□ 0.68
C4orf48-201ENST00000409248 ANXA8L1Q5VT79 327 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 TMEM156Q8N614 296 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 CPSF7Q8N684 471 aaKnown RBP19.27■□□□□ 0.68
C4orf48-201ENST00000409248 MDS2Q8NDY4 140 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 VPS37AQ8NEZ2 397 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 OR8J2Q8NGG1 315 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 OR9I1Q8NGQ6 314 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 NUDT8Q8WV74 236 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 ACSS1Q9NUB1 689 aaPredicted RBP19.27■□□□□ 0.68
C4orf48-201ENST00000409248 ANKRD10Q9NXR5 420 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 LRFN1Q9P244 771 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 MYOTQ9UBF9 498 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 VPS4AQ9UN37 437 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 ERVK-19Q9WJR5 959 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 ARL2BPQ9Y2Y0 163 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 YARS2Q9Y2Z4 477 aaKnown RBP19.27■□□□□ 0.68
C4orf48-201ENST00000409248 PCDHGB6Q9Y5F9 930 aa19.27■□□□□ 0.68
C4orf48-201ENST00000409248 C9JVG2 144 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 PYCARD-AS1I3L0S3 204 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 IL6P05231 212 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 FRKP42685 505 aaPredicted RBP19.26■□□□□ 0.67
C4orf48-201ENST00000409248 HLCSP50747 726 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 POLR2JP52435 117 aaKnown RBP19.26■□□□□ 0.67
C4orf48-201ENST00000409248 MANFP55145 182 aaKnown RBP19.26■□□□□ 0.67
C4orf48-201ENST00000409248 KCNK10P57789 538 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 RNF4P78317 190 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 DUSP2Q05923 314 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 ZNF267Q14586 743 aaPredicted RBP19.26■□□□□ 0.67
C4orf48-201ENST00000409248 IGFBP7Q16270 282 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 MPEG1Q2M385 716 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 AGKQ53H12 422 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 OR4F3Q6IEY1 312 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 RNF111Q6ZNA4 994 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 DGAT2L6Q6ZPD8 337 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 GPALPP1Q8IXQ4 340 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 ZNF321PQ8N8H1 164 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 TMEM178AQ8NBL3 297 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 GALNT11Q8NCW6 608 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 OR9A2Q8NGT5 310 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 NUBPLQ8TB37 319 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 TMEM125Q96AQ2 219 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 AMDHD1Q96NU7 426 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 GLIPR2Q9H4G4 154 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 CXorf21Q9HAI6 301 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 SAR1AQ9NR31 198 aa19.26■□□□□ 0.67
C4orf48-201ENST00000409248 CCDC167Q9P0B6 97 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms