RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 MFSD4BQ5TF39 518 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 ZC3H14Q6PJT7 736 aaKnown RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 C16orf62Q7Z3J2 963 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 BMP8AQ7Z5Y6 402 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 KRT73Q86Y46 540 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 METTL25Q8N6Q8 603 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 SIMC1Q8NDZ2 872 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 OR5K1Q8NHB7 308 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 GIMAP5Q96F15 307 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 RBM18Q96H35 190 aaKnown RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 CNBD2Q96M20 576 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 COL21A1Q96P44 957 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 TREX2Q9BQ50 279 aaPredicted RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 ALOXE3Q9BYJ1 711 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 SLC7A5P2Q9GIP4 190 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 CLK4Q9HAZ1 481 aaKnown RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 C8orf4Q9NR00 106 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 SEMA5BQ9P283 1151 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 SEC14L3Q9UDX4 400 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 SH3GLB1Q9Y371 365 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 TMEM184BQ9Y519 407 aaPredicted RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 MAGED1Q9Y5V3 778 aaPredicted RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 A0A0C4DFX4 3053 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 IGHV5-10-1A0A0J9YXX1 117 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 FAM86C2PA6NEL3 165 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 DUXAA6NLW8 204 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 TMEM229AB2RXF0 380 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 TOX3O15405 576 aaPredicted RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 JRKO75564 520 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 SERPINB7O75635 380 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 PRSS23O95084 383 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 UBTFL6P0CB48 400 aaPredicted RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 CKMT1AP12532 417 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 MAOAP21397 527 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 YAP1P46937 504 aaKnown RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 ARHGDIAP52565 204 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 ARSFP54793 590 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 SQSTM1Q13501 440 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 EXOSC7Q15024 291 aaKnown RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 PRICKLE4Q2TBC4 344 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 PHF19Q5T6S3 580 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 C1orf189Q5VU69 101 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 MFSD12Q6NUT3 480 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 PIWIL3Q7Z3Z3 882 aaKnown RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 HMGN2P46Q86SG4 172 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 HS3ST5Q8IZT8 346 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 LGI4Q8N135 537 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 OR2L13Q8N349 312 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 SVOPLQ8N434 492 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 OR4D9Q8NGE8 314 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 BBS10Q8TAM1 723 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 MIPOL1Q8TD10 442 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 GEMIN6Q8WXD5 167 aaKnown RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 PROX1Q92786 737 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 RIT1Q92963 219 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 ZNF501Q96CX3 271 aaPredicted RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 SLC35A4Q96G79 324 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 CCDC74BQ96LY2 380 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 DGAT2Q96PD7 388 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 OSBPL11Q9BXB4 747 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 REEP1Q9H902 201 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 EXD2Q9NVH0 621 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 MAT2BQ9NZL9 334 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 NTMQ9P121 344 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 ZNF639Q9UID6 485 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 CDC14AQ9UNH5 594 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 C19orf53Q9UNZ5 99 aaPredicted RBP8.09□□□□□ -1.11
TDP1-203ENST00000393454 ZNF451Q9Y4E5 1061 aa8.09□□□□□ -1.11
TDP1-203ENST00000393454 H3BMH7 237 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 DENRO43583 198 aaKnown RBP8.08□□□□□ -1.12
TDP1-203ENST00000393454 ASNA1O43681 348 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 SLITRK5O94991 958 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 MFN2O95140 757 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 H6PDO95479 791 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 IFNA16P05015 189 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 CT62P0C5K7 136 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 ITGA2P17301 1181 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 TNNI3P19429 210 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 FBLP22087 321 aaKnown RBP8.08□□□□□ -1.12
TDP1-203ENST00000393454 PRKACGP22612 351 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 DCTP40126 519 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 MAN2A2P49641 1150 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 TXNL4AP83876 142 aaKnown RBP8.08□□□□□ -1.12
TDP1-203ENST00000393454 HPCAP84074 193 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 ACY1Q03154 408 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 FUT5Q11128 374 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 FOXD4Q12950 439 aaPredicted RBP8.08□□□□□ -1.12
TDP1-203ENST00000393454 PDK3Q15120 406 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 DUSP7Q16829 419 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 PROX2Q3B8N5 592 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 CDC73Q6P1J9 531 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 DGAT2L6Q6ZPD8 337 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 ARHGAP22Q7Z5H3 698 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 TMEM179BQ7Z7N9 219 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 HIPK1Q86Z02 1210 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 GALNT12Q8IXK2 581 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 ST13P4Q8IZP2 240 aaPredicted RBP8.08□□□□□ -1.12
TDP1-203ENST00000393454 SLC16A11Q8NCK7 471 aa8.08□□□□□ -1.12
TDP1-203ENST00000393454 ZNF675Q8TD23 568 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms