RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 C11orf63Q6NUN7 778 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 AGTRAPQ6RW13 159 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 SLC29A4Q7RTT9 530 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 CILP2Q8IUL8 1156 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 LRRC25Q8N386 305 aaPredicted RBP7.18□□□□□ -1.26
CASP4-201ENST00000393150 ABHD11Q8NFV4 315 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 ZPLD1Q8TCW7 415 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 CCT6BQ92526 530 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 INTS12Q96CB8 462 aaKnown RBP7.18□□□□□ -1.26
CASP4-201ENST00000393150 REPS1Q96D71 796 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 SPACA9Q96E40 222 aaPredicted RBP7.18□□□□□ -1.26
CASP4-201ENST00000393150 SNF8Q96H20 258 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 RBM18Q96H35 190 aaKnown RBP7.18□□□□□ -1.26
CASP4-201ENST00000393150 BIRC8Q96P09 236 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 ALOXE3Q9BYJ1 711 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 SHARPINQ9H0F6 387 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 PARVBQ9HBI1 364 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 DNAJC11Q9NVH1 559 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 KLHL28Q9NXS3 571 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 PSD3Q9NYI0 1048 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 ELOVL5Q9NYP7 299 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 MARCH4Q9P2E8 410 aaPredicted RBP7.18□□□□□ -1.26
CASP4-201ENST00000393150 PLA2G2DQ9UNK4 145 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 TESMINQ9Y4I5 508 aa7.18□□□□□ -1.26
CASP4-201ENST00000393150 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.18□□□□□ -1.26
CASP4-201ENST00000393150 ARHGAP21Q5T5U3 1957 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 TCRBV5S2A0A599 114 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 ZNF503-AS2A6NEH8 195 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 BTNL10A8MVZ5 291 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 A8MXE2 369 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 NUDT19A8MXV4 375 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 C17orf105B2RV13 164 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 C16orf97H3BN30 126 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 CTNSO60931 367 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 ACSL3O95573 720 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 C1QAP02745 245 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 SERPINA6P08185 405 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 POU2F1P14859 743 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 OGNP20774 298 aaKnown RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 CTNNA1P35221 906 aaKnown RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 CYLC1P35663 651 aaPredicted RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 PCYT1AP49585 367 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 TMED10P49755 219 aaKnown RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 HADHBP55084 474 aaKnown RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 WNT3P56703 355 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 NRG3P56975 720 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 RAB38P57729 211 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 RPS4XP62701 263 aaKnown RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 CRYZQ08257 329 aaKnown RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 FGFBP1Q14512 234 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 KBTBD12Q3ZCT8 623 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 BEX5Q5H9J7 111 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 CTSL3PQ5NE16 218 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 PRAMEF20Q5VT98 475 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 VASNQ6EMK4 673 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 TRIM40Q6P9F5 258 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 BHLHB9Q6PI77 547 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 MICALCLQ6ZW33 695 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 GRAMD2AQ8IUY3 354 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 CA13Q8N1Q1 262 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 MYO1HQ8N1T3 1032 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 OR2W6PQ8NHA6 318 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 NUBPLQ8TB37 319 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 PAQR8Q8TEZ7 354 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 SLC5A11Q8WWX8 675 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 LPGAT1Q92604 370 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 KCNJ9Q92806 393 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 HS6ST2Q96MM7 605 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 ZNF778Q96MU6 729 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 WFIKKN1Q96NZ8 548 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 RHNO1Q9BSD3 238 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 FRMD8P1Q9BZ68 369 aaPredicted RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 ROGDIQ9GZN7 287 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 BARX1Q9HBU1 254 aaPredicted RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 SEMA4BQ9NPR2 832 aaPredicted RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 ZNF701Q9NV72 531 aaPredicted RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 ARL15Q9NXU5 204 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 ASH2LQ9UBL3 628 aa7.17□□□□□ -1.26
CASP4-201ENST00000393150 TRMT6Q9UJA5 497 aaKnown RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 PTBP2Q9UKA9 531 aaKnown RBP7.17□□□□□ -1.26
CASP4-201ENST00000393150 USF3Q68DE3 2245 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 UBFD1O14562 309 aaKnown RBP7.16□□□□□ -1.26
CASP4-201ENST00000393150 PRKNO60260 465 aaPredicted RBP7.16□□□□□ -1.26
CASP4-201ENST00000393150 CRHP06850 196 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 RFPL3SP0C7P2 107 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 PPP3CBP16298 524 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 NPPBP16860 134 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 GSTM2P28161 218 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 CD79BP40259 229 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 CDK9P50750 372 aaKnown RBP7.16□□□□□ -1.26
CASP4-201ENST00000393150 PRR5P85299 388 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 SRYQ05066 204 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 SP140Q13342 867 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 CUL1Q13616 776 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 ASTE1Q2TB18 679 aaPredicted RBP7.16□□□□□ -1.26
CASP4-201ENST00000393150 NHSL2Q5HYW2 709 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 TOR1AIP1Q5JTV8 583 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 DUPD1Q68J44 220 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 NEPROQ6NW34 567 aa7.16□□□□□ -1.26
CASP4-201ENST00000393150 AAGABQ6PD74 315 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms