RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 NTMQ9P121 344 aa17.47■□□□□ 0.39
SMN2-202ENST00000380742 COPS7AQ9UBW8 275 aa17.47■□□□□ 0.39
SMN2-202ENST00000380742 BCAP29Q9UHQ4 241 aa17.47■□□□□ 0.39
SMN2-202ENST00000380742 C19orf53Q9UNZ5 99 aaPredicted RBP17.47■□□□□ 0.39
SMN2-202ENST00000380742 NDUFAF1Q9Y375 327 aa17.47■□□□□ 0.39
SMN2-202ENST00000380742 SNX8Q9Y5X2 465 aa17.47■□□□□ 0.39
SMN2-202ENST00000380742 KCNMB2Q9Y691 235 aa17.47■□□□□ 0.39
SMN2-202ENST00000380742 MGAQ8IWI9 3026 aa17.47■□□□□ 0.39
SMN2-202ENST00000380742 PTPRQQ9UMZ3 2332 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 TRBV11-1A0A0K0K1C0 115 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 RFXANKO14593 260 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 ANGPT2O15123 496 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 EMC8O43402 210 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 PRKNO60260 465 aaPredicted RBP17.46■□□□□ 0.39
SMN2-202ENST00000380742 PSMG1O95456 288 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 SERPINA7P05543 415 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 COX4I1P13073 169 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 CCT3P49368 545 aaKnown RBP17.46■□□□□ 0.39
SMN2-202ENST00000380742 EMDP50402 254 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 CLCN2P51788 898 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 GAB1Q13480 694 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 CYLC2Q14093 348 aaPredicted RBP17.46■□□□□ 0.39
SMN2-202ENST00000380742 FAM91A1Q658Y4 838 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 DNAJC14Q6Y2X3 702 aaPredicted RBP17.46■□□□□ 0.39
SMN2-202ENST00000380742 TMEM64Q6YI46 380 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 C9orf40Q8IXQ3 194 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 CLEC1AQ8NC01 280 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 OR5AK3PQ8NH89 298 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 CRELD1Q96HD1 420 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 THOC3Q96J01 351 aaKnown RBP17.46■□□□□ 0.39
SMN2-202ENST00000380742 PAIP1Q9H074 479 aaKnown RBP17.46■□□□□ 0.39
SMN2-202ENST00000380742 DDX18Q9NVP1 670 aaKnown RBP17.46■□□□□ 0.39
SMN2-202ENST00000380742 SLAMF8Q9P0V8 285 aa17.46■□□□□ 0.39
SMN2-202ENST00000380742 LEF1Q9UJU2 399 aaPredicted RBP17.46■□□□□ 0.39
SMN2-202ENST00000380742 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 DNAJB5O75953 348 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 C1QCP02747 245 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 HOXB9P17482 250 aaPredicted RBP17.45■□□□□ 0.38
SMN2-202ENST00000380742 SOAT1P35610 550 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 TRPC1P48995 793 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 SOX8P57073 446 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 C6orf10Q5SRN2 563 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 HSDL2Q6YN16 418 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 ZNF621Q6ZSS3 439 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 NUP43Q8NFH3 380 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 C16orf52Q8NHV5 167 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 RP9Q8TA86 221 aaKnown RBP17.45■□□□□ 0.38
SMN2-202ENST00000380742 PSMF1Q92530 271 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 GIMAP5Q96F15 307 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 C3orf14Q9HBI5 128 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 ZCCHC3Q9NUD5 404 aaKnown RBP17.45■□□□□ 0.38
SMN2-202ENST00000380742 MAP10Q9P2G4 905 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 DTX4Q9Y2E6 619 aa17.45■□□□□ 0.38
SMN2-202ENST00000380742 A0A096LPI6 279 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 TMEM200CA6NKL6 621 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 PRAMEF2O60811 474 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 BCAS2O75934 225 aaPredicted RBP17.44■□□□□ 0.38
SMN2-202ENST00000380742 UQCRC2P22695 453 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 PRKAG1P54619 331 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 RNF4P78317 190 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 GTDC1Q4AE62 458 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 LRIF1Q5T3J3 769 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 REP15Q6BDI9 236 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 APLFQ8IW19 511 aaPredicted RBP17.44■□□□□ 0.38
SMN2-202ENST00000380742 GALNT16Q8N428 558 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 DPP10Q8N608 796 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 OR8K3Q8NH51 312 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 SFXN5Q8TD22 340 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 BRIX1Q8TDN6 353 aaKnown RBP17.44■□□□□ 0.38
SMN2-202ENST00000380742 PHF12Q96QT6 1004 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 NPAS2Q99743 824 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 LIN28AQ9H9Z2 209 aaKnown RBP17.44■□□□□ 0.38
SMN2-202ENST00000380742 ARL8BQ9NVJ2 186 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.44■□□□□ 0.38
SMN2-202ENST00000380742 VPS4AQ9UN37 437 aa17.44■□□□□ 0.38
SMN2-202ENST00000380742 HEMK1Q9Y5R4 338 aaPredicted RBP17.44■□□□□ 0.38
SMN2-202ENST00000380742 RNF103-CHMP3A0A140T963 221 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 A6NL46 340 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 OR6C76A6NM76 312 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 ZFAND5O76080 213 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 ZCCHC18P0CG32 403 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 ITGA3P26006 1051 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 CCL11P51671 97 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 PRR5P85299 388 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 STX5Q13190 355 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 MYBPC3Q14896 1274 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 EBPQ15125 230 aaKnown RBP17.43■□□□□ 0.38
SMN2-202ENST00000380742 SPDYE7PQ495Y7 208 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 COQ5Q5HYK3 327 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 H3F3CQ6NXT2 135 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 JMJD6Q6NYC1 403 aaPredicted RBP17.43■□□□□ 0.38
SMN2-202ENST00000380742 DLEU7Q6UYE1 221 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 SZRD1Q7Z422 152 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 MSRB3Q8IXL7 192 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 THAP3Q8WTV1 239 aaPredicted RBP17.43■□□□□ 0.38
SMN2-202ENST00000380742 SLC35A5Q9BS91 424 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 DEFB126Q9BYW3 111 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 LHPPQ9H008 270 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 EPS8L2Q9H6S3 715 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 FOLH1BQ9HBA9 442 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms