RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PDYNP01213 254 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 FAM153BP0C7A2 387 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 FAM153CQ494X1 144 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 TEX35Q5T0J7 233 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 ACMSDQ8TDX5 336 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 EPB41L4BQ9H329 900 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 TRPS1Q9UHF7 1281 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 BCAP29Q9UHQ4 241 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 ZNF225Q9UK10 706 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 CES1P1Q9UKY3 287 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 PSME2Q9UL46 239 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 CFL2Q9Y281 166 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 HCFC1P51610 2035 aa19.28■□□□□ 0.68
VSX1-201ENST00000376707 HSPB2A8KAH6 182 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 ZWINTO95229 277 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 RHOXF2BP0C7M4 288 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 CSNK2A2P19784 350 aaPredicted RBP19.27■□□□□ 0.68
VSX1-201ENST00000376707 TAC1P20366 129 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 GPX3P22352 226 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 ABCD3P28288 659 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 HSD17B3P37058 310 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 FEN1P39748 380 aaKnown RBP19.27■□□□□ 0.68
VSX1-201ENST00000376707 CASP3P42574 277 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 GALNT1Q10472 559 aaPredicted RBP19.27■□□□□ 0.68
VSX1-201ENST00000376707 SLC29A2Q14542 456 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 TOMM20Q15388 145 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 HSPB2Q16082 182 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 KLHL29Q96CT2 875 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 RHOXF2Q9BQY4 288 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 NXF5Q9H1B4 397 aaKnown RBP19.27■□□□□ 0.68
VSX1-201ENST00000376707 C15orf41Q9Y2V0 281 aa19.27■□□□□ 0.68
VSX1-201ENST00000376707 AHRRA9YTQ3 701 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 DLX3O60479 287 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 ATP1B1P05026 303 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 S1PR1P21453 382 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 CDK9P50750 372 aaKnown RBP19.26■□□□□ 0.67
VSX1-201ENST00000376707 DLX5P56178 289 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 CLCQ05315 142 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 CRYZQ08257 329 aaKnown RBP19.26■□□□□ 0.67
VSX1-201ENST00000376707 MAP4K2Q12851 820 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 TESK1Q15569 626 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 NNATQ16517 81 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 PRICKLE4Q2TBC4 344 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 ZNF678Q5SXM1 525 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 FAM111BQ6SJ93 734 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 PM20D2Q8IYS1 436 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 MMP21Q8N119 569 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 C1orf52Q8N6N3 182 aaKnown RBP19.26■□□□□ 0.67
VSX1-201ENST00000376707 EIF1ADQ8N9N8 165 aaKnown RBP19.26■□□□□ 0.67
VSX1-201ENST00000376707 MZB1Q8WU39 189 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 TM4SF18Q96CE8 201 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 GNRHR2Q96P88 292 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 ZNF382Q96SR6 550 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 HBEGFQ99075 208 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 TIMP4Q99727 224 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 FAIM2Q9BWQ8 316 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 METTL7AQ9H8H3 244 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 MAT2BQ9NZL9 334 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 PSMC3IPQ9P2W1 217 aaPredicted RBP19.26■□□□□ 0.67
VSX1-201ENST00000376707 DTX4Q9Y2E6 619 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 L3MBTL1Q9Y468 752 aa19.26■□□□□ 0.67
VSX1-201ENST00000376707 INTS1Q8N201 2190 aaKnown RBP19.25■□□□□ 0.67
VSX1-201ENST00000376707 CDH16O75309 829 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 PPM1BO75688 479 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 OR4F21O95013 312 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 HPNP05981 417 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 ABCB1P08183 1280 aaPredicted RBP19.25■□□□□ 0.67
VSX1-201ENST00000376707 GSTA1P08263 222 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 NAGAP17050 411 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 ALDH9A1P49189 494 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 EXOSC7Q15024 291 aaKnown RBP19.25■□□□□ 0.67
VSX1-201ENST00000376707 ACSF3Q4G176 576 aaPredicted RBP19.25■□□□□ 0.67
VSX1-201ENST00000376707 UNC50Q53HI1 259 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 FNDC7Q5VTL7 733 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 ARSKQ6UWY0 536 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 SEM1Q6ZVN7 128 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 TMEM41AQ96HV5 264 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 TMEM237Q96Q45 408 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 ITPAQ9BY32 194 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 UBQLN3Q9H347 655 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 VPS29Q9UBQ0 182 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 ZNF780BQ9Y6R6 833 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 F8P00451 2351 aa19.25■□□□□ 0.67
VSX1-201ENST00000376707 DVL2O14641 736 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 GNB5O14775 395 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 SUPT7LO94864 414 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 ESRRBO95718 433 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 EPPINO95925 133 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 KRT6AP02538 564 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 KRT6BP04259 564 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 HSD3B1P14060 373 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 IMPDH1P20839 514 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 ATP5F1P24539 256 aaPredicted RBP19.24■□□□□ 0.67
VSX1-201ENST00000376707 HSD3B2P26439 372 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 KRT6CP48668 564 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 PRKAA2P54646 552 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 TRA2BP62995 288 aaKnown RBP19.24■□□□□ 0.67
VSX1-201ENST00000376707 PLCXD2Q0VAA5 305 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 MGAT2Q10469 447 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 RASA2Q15283 850 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms