RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 POLR2LP62875 67 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 BNC1Q01954 994 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 UBE3AQ05086 875 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 INSL4Q14641 139 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 SMUG1Q53HV7 270 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 ARSIQ5FYB1 569 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 CEP78Q5JTW2 689 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 HIST2H2AA3Q6FI13 130 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 CNIH2Q6PI25 160 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 ZNF730Q6ZMV8 503 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 TMEM25Q86YD3 366 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 FAM26EQ8N5C1 309 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 ZFAND1Q8TCF1 268 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 DEDD2Q8WXF8 326 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 SORCS1Q8WY21 1168 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 ING5Q8WYH8 240 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 ZSWIM3Q96MP5 696 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 IL17FQ96PD4 163 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 ANKRA2Q9H9E1 313 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 B3GAT2Q9NPZ5 323 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 SF3B6Q9Y3B4 125 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 GOLGA4Q13439 2230 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 LEFTY1O75610 366 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 EPHX1P07099 455 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 OR12D1P0DN82 309 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 CPN2P22792 545 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 HLA-DMAP28067 261 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 SOX18P35713 384 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 RPL3P39023 403 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 IL12RB1P42701 662 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 MAP2K3P46734 347 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 GIPRP48546 466 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 P2RX3P56373 397 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 RAB25P57735 213 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 SNAPC1Q16533 368 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 SYPL1Q16563 259 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 PLK5Q496M5 336 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 MPP7Q5T2T1 576 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 TYW3Q6IPR3 259 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 C6orf120Q7Z4R8 191 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 ADGRF3Q8IZF5 1079 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 TRAM1L1Q8N609 369 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 C19orf18Q8NEA5 215 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 UCN3Q969E3 161 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 GLYATL1Q969I3 302 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 TRIM63Q969Q1 353 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 GFM1Q96RP9 751 aaKnown RBP13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 EFCAB11Q9BUY7 163 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 A4GNTQ9UNA3 340 aa13.34□□□□□ -0.27
CLCNKA-202ENST00000375692 PRAMEF27A3QJZ7 478 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 HMGN4O00479 90 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 KCNJ5P48544 419 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 GZMKP49863 264 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 GAS1P54826 345 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 WNT4P56705 351 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 TAP2Q03519 686 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 SPDYE7PQ495Y7 208 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 RNLSQ5VYX0 342 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 TRIQKQ629K1 86 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 NXPE4Q6UWF7 544 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 UNC5DQ6UXZ4 953 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 SZRD1Q7Z422 152 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 SLC5A11Q8WWX8 675 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 NEURL3Q96EH8 262 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 ZNF354BQ96LW1 612 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 FUZQ9BT04 418 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 PRR14Q9BWN1 585 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 POLDIP3Q9BY77 421 aaKnown RBP13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 PLA2G12AQ9BZM1 189 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 A4GALTQ9NPC4 353 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 SEC14L3Q9UDX4 400 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 SLC25A13Q9UJS0 675 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 PLAGL1Q9UM63 463 aa13.33□□□□□ -0.27
CLCNKA-202ENST00000375692 CASKO14936 926 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 SLC28A2O43868 658 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 TIMP2P16035 220 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 MYL12AP19105 171 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 ERP29P30040 261 aaKnown RBP13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 PRLHRP49683 370 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 ZNF284Q2VY69 593 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 BTBD16Q32M84 506 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 LHFPL3Q86UP9 236 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 IQCHQ86VS3 1027 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 TCTE3Q8IZS6 198 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 CPXM2Q8N436 756 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 VN1R2Q8NFZ6 395 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 OR5D16Q8NGK9 328 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 SLC9A6Q92581 669 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 RNFT2Q96EX2 444 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 TEFMQ96QE5 360 aaKnown RBP13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 GON7Q9BXV9 100 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 EGLN3Q9H6Z9 239 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 PPP1R3EQ9H7J1 279 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 KCNK12Q9HB15 430 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 ZSCAN32Q9NX65 697 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 FBXW2Q9UKT8 454 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 ITM2BQ9Y287 266 aa13.33□□□□□ -0.28
CLCNKA-202ENST00000375692 NOTCH4Q99466 2003 aa13.32□□□□□ -0.28
CLCNKA-202ENST00000375692 LOC102723532A0A0G2JNH3 316 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms