RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.26□□□□□ -1.09
SYNE1-206ENST00000367253 MYH3P11055 1940 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 ATP6AP2A0A1C7CYW4 349 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 SLC35F4A4IF30 521 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 LCMT2O60294 686 aaKnown RBP8.26□□□□□ -1.09
SYNE1-206ENST00000367253 ATP6AP2O75787 350 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 MT-CO2P00403 227 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 CDH12P55289 794 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 FASTKD3Q14CZ7 662 aaKnown RBP8.26□□□□□ -1.09
SYNE1-206ENST00000367253 TRAM2Q15035 370 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF805Q5CZA5 627 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 GPR153Q6NV75 609 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 GTF2H4Q92759 462 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 TXN2Q99757 166 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 DCSTAMPQ9H295 470 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 PDLIM7Q9NR12 457 aa8.26□□□□□ -1.09
SYNE1-206ENST00000367253 ADAMDEC1O15204 470 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 PAK4O96013 591 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 FABP3P05413 133 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 SAGP10523 405 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 PGAM2P15259 253 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 GOT1P17174 413 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 PXNP49023 591 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 LSAMPQ13449 338 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 SLC36A3Q495N2 470 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ABCA11PQ4W5N1 156 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 EEF1DP3Q658K8 133 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 UNC5AQ6ZN44 842 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 OR1F2PQ96R84 312 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 TMEM45AQ9NWC5 275 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF226Q9NYT6 803 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 RIIAD1A6NNX1 92 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 CNIH1O95406 144 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 SCGB1D1O95968 90 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 CSTAP01040 98 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 TMIGD3P0DMS9 266 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 BMP1P13497 986 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 HSD11B1P28845 292 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 HNRNPFP52597 415 aaKnown RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ADGRE1Q14246 886 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 TMEM44Q2T9K0 475 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 RNF212Q495C1 297 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 TMEM41BQ5BJD5 291 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ANKRD22Q5VYY1 191 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 C6orf15Q6UXA7 325 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 MFSD6LQ8IWD5 586 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 TSPEARQ8WU66 669 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 DEDD2Q8WXF8 326 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 RGMAQ96B86 450 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 KCTD15Q96SI1 283 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 SEMA6BQ9H3T3 888 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 TCF7L1Q9HCS4 588 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 SLC5A6Q9Y289 635 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 TLR6Q9Y2C9 796 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 FCF1Q9Y324 198 aaKnown RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 F8W036 122 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 FFAR3O14843 346 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ANKRD28O15084 1053 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 GPR42O15529 346 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 GATCO43716 136 aaKnown RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 SLC37A4O43826 429 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 UCHL1P09936 223 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 TAL1P17542 331 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 PRDX6P30041 224 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 RYKP34925 604 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 MPLP40238 635 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 YPEL5P62699 121 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 BLOC1S1P78537 153 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 MVKQ03426 396 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 SLC18A2Q05940 514 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 RAB31Q13636 194 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 CYP27C1Q4G0S4 372 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 DCAF12L1Q5VU92 463 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 SLC6A19Q695T7 634 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 TMEM207Q6UWW9 146 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF782Q6ZMW2 699 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 SPATA19Q7Z5L4 167 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 IQCKQ8N0W5 287 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 GHDCQ8N2G8 530 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 FITM2Q8N6M3 262 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 STK35Q8TDR2 534 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ASB5Q8WWX0 329 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ADAMTS14Q8WXS8 1223 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 FGF13Q92913 245 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 KCTD7Q96MP8 289 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 POLR2J2Q9GZM3 115 aaKnown RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 SLA2Q9H6Q3 261 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 HEBP1Q9NRV9 189 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 C4orf47A7E2U8 309 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF623O75123 536 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 UROSP10746 265 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 UBL4AP11441 157 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 HNRNPLP14866 589 aaKnown RBP eCLIP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF20P17024 532 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ADH7P40394 386 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 ZNF143P52747 638 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-206ENST00000367253 S100A10P60903 97 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 RAB10P61026 200 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 NCS1P62166 190 aa8.25□□□□□ -1.09
SYNE1-206ENST00000367253 PON3Q15166 354 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms