RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 CT45A9P0DMV2 189 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 CSNK2A2P19784 350 aaPredicted RBP3.74□□□□□ -1.81
LIG4-201ENST00000356922 S100A3P33764 101 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 FOLR3P41439 243 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ASMTP46597 345 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 MAN2A2P49641 1150 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 OR4D2P58180 307 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 PSG6Q00889 435 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 FUT7Q11130 342 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 MAP4K2Q12851 820 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 MAD2L1Q13257 205 aaPredicted RBP3.74□□□□□ -1.81
LIG4-201ENST00000356922 ADRM1Q16186 407 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 CT45A2Q5DJT8 189 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 DCAF10Q5QP82 559 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ANGPTL8Q6UXH0 198 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 NPSR1Q6W5P4 371 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 LRRC69Q6ZNQ3 347 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 RINLQ6ZS11 566 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ZNF621Q6ZSS3 439 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ZNF227Q86WZ6 799 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 LRRC25Q8N386 305 aaPredicted RBP3.74□□□□□ -1.81
LIG4-201ENST00000356922 SIRT6Q8N6T7 355 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 RNF148Q8N7C7 305 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 FAM156AQ8NDB6 213 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ZNF248Q8NDW4 579 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 OR52R1Q8NGF1 315 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 STON2Q8WXE9 905 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 RAB8BQ92930 207 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 MAL2Q969L2 176 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 NCLNQ969V3 563 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 SLC7A6OSQ96CW6 309 aaPredicted RBP3.74□□□□□ -1.81
LIG4-201ENST00000356922 CCNL2Q96S94 520 aaPredicted RBP3.74□□□□□ -1.81
LIG4-201ENST00000356922 DKK4Q9UBT3 224 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 HRH3Q9Y5N1 445 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 MYO18BQ8IUG5 2567 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 SVILO95425 2214 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 CENPVL1A0A0U1RR11 272 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ARGFXA6NJG6 315 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 CCT8L1PA6NM43 557 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 A8MUI8 341 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 CFLARO15519 480 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 PDPK1O15530 556 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 RRP8O43159 456 aaKnown RBP3.74□□□□□ -1.81
LIG4-201ENST00000356922 DYRK3O43781 588 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 FCMRO60667 390 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 TBX19O60806 448 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 WISP1O95388 367 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ALPPP05187 535 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 MPIP34949 423 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 MAP3K8P41279 467 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ATP4BP51164 291 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 MTPNP58546 118 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 SLC26A5P58743 744 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 FUT5Q11128 374 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 MAPKAPK3Q16644 382 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 DEFB109BQ30KR1 87 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 CCNJQ5T5M9 372 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 TCTN3Q6NUS6 607 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 C8orf82Q6P1X6 216 aaPredicted RBP3.74□□□□□ -1.81
LIG4-201ENST00000356922 C19orf48Q6RUI8 117 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 TRPM8Q7Z2W7 1104 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 KIRREL3Q8IZU9 778 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 OR2L13Q8N349 312 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 PSMA8Q8TAA3 256 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ELP5Q8TE02 316 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 PIK3R3Q92569 461 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ADIPOR1Q96A54 375 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ZNF524Q96C55 264 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 CLPTM1LQ96KA5 538 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 CCDC115Q96NT0 180 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 PANX1Q96RD7 426 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 BBS4Q96RK4 519 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ZBTB18Q99592 522 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 FAIM2Q9BWQ8 316 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 BHLHE41Q9C0J9 482 aaPredicted RBP3.74□□□□□ -1.81
LIG4-201ENST00000356922 ZNF700Q9H0M5 742 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 CLK4Q9HAZ1 481 aaKnown RBP3.74□□□□□ -1.81
LIG4-201ENST00000356922 ADAP2Q9NPF8 381 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 GIMAP4Q9NUV9 329 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 TAS2R9Q9NYW1 312 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 FLRT3Q9NZU0 649 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 KCND3Q9UK17 655 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ZMIZ1Q9ULJ6 1067 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 MRPS33Q9Y291 106 aaKnown RBP3.74□□□□□ -1.81
LIG4-201ENST00000356922 CLCA3PQ9Y6N3 262 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 ZNF780BQ9Y6R6 833 aa3.74□□□□□ -1.81
LIG4-201ENST00000356922 CENPEQ02224 2701 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 GXYLT2A0PJZ3 443 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 WWP2O00308 870 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 RNASET2O00584 256 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 OR10H2O60403 315 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 GUCY1B2O75343 617 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 GCM2O75603 506 aaPredicted RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 IL6P05231 212 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 SLC6A2P23975 617 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 MAPK1P28482 360 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 CCT3P49368 545 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 CRYBA2P53672 197 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 ELAVL1Q15717 326 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 INPP5JQ15735 1006 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms