RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RUVBL1Q9Y265 456 aaKnown RBP17.65■□□□□ 0.42
SCARF1-202ENST00000348987 DOCK6Q96HP0 2047 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 STK25O00506 426 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 IFNW1P05000 195 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 ANXA4P09525 319 aaPredicted RBP17.65■□□□□ 0.42
SCARF1-202ENST00000348987 CFL1P23528 166 aaKnown RBP17.65■□□□□ 0.42
SCARF1-202ENST00000348987 SLC6A12P48065 614 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 ATP12AP54707 1039 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 TPRG1Q6ZUI0 275 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 USP45Q70EL2 814 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 CHMP1BQ7LBR1 199 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 ADGRF3Q8IZF5 1079 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 SCAMP4Q969E2 229 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 PRR14Q9BWN1 585 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 ABCG5Q9H222 651 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 NDOR1Q9UHB4 597 aa17.65■□□□□ 0.42
SCARF1-202ENST00000348987 NINQ8N4C6 2090 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 DHFRP00374 187 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 ADAP00813 363 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 NR2F6P10588 404 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 ADAM15Q13444 863 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 PUM1Q14671 1186 aaKnown RBP eCLIP17.64■□□□□ 0.41
SCARF1-202ENST00000348987 UAP1L1Q3KQV9 507 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 ZNF385BQ569K4 471 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 ST8SIA4Q92187 359 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 LINC00052Q96N35 136 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 KCMF1Q9P0J7 381 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 INSL5Q9Y5Q6 135 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 TMEM202A6NGA9 273 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 ETHE1O95571 254 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 SOD2P04179 222 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 PCSK2P16519 638 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 GABRR2P28476 465 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 WDR5P61964 334 aaKnown RBP17.64■□□□□ 0.41
SCARF1-202ENST00000348987 TMEM91Q6ZNR0 172 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 RTL4Q6ZR62 310 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 LUZP2Q86TE4 346 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 DACT3Q96B18 629 aaPredicted RBP17.64■□□□□ 0.41
SCARF1-202ENST00000348987 ZSWIM3Q96MP5 696 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 ZDHHC6Q9H6R6 413 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 C1GALT1Q9NS00 363 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 TNFRSF10DQ9UBN6 386 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 PHF11Q9UIL8 331 aa17.64■□□□□ 0.41
SCARF1-202ENST00000348987 LOC105369274A0A096LPK9 316 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 ARRDC5A6NEK1 342 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 SOD1P00441 154 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 TFPIP10646 304 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 JUPP14923 745 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 ELK1P19419 428 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 SDHBP21912 280 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 HLA-FP30511 346 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 CD79BP40259 229 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 GBX2P52951 348 aaPredicted RBP17.63■□□□□ 0.41
SCARF1-202ENST00000348987 RAE1P78406 368 aaKnown RBP17.63■□□□□ 0.41
SCARF1-202ENST00000348987 RPL6Q02878 288 aaKnown RBP17.63■□□□□ 0.41
SCARF1-202ENST00000348987 C2orf80Q0P641 193 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 OCLNQ16625 522 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 ANXA8L1Q5VT79 327 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 TPGS2Q68CL5 300 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 CFAP77Q6ZQR2 320 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 GET4Q7L5D6 327 aaPredicted RBP17.63■□□□□ 0.41
SCARF1-202ENST00000348987 KIAA0907Q7Z7F0 614 aaPredicted RBP17.63■□□□□ 0.41
SCARF1-202ENST00000348987 HS6ST3Q8IZP7 471 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 OR4N4Q8N0Y3 316 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 SLAIN1Q8ND83 568 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 GPR156Q8NFN8 814 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 UFD1Q92890 307 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 MARC2Q969Z3 335 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 SCMH1Q96GD3 660 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 LRR1Q96L50 414 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 LYSMD1Q96S90 227 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 POLR2J3Q9H1A7 115 aaKnown RBP17.63■□□□□ 0.41
SCARF1-202ENST00000348987 TBC1D17Q9HA65 648 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 TESQ9UGI8 421 aaKnown RBP17.63■□□□□ 0.41
SCARF1-202ENST00000348987 MGAT4DA6NG13 374 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 NUPL2O15504 423 aaKnown RBP17.63■□□□□ 0.41
SCARF1-202ENST00000348987 C6orf47O95873 294 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 OLFM2O95897 454 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 IFNA16P05015 189 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 HIST1H2AGP0C0S8 130 aaPredicted RBP17.63■□□□□ 0.41
SCARF1-202ENST00000348987 CBSLP0DN79 551 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 HIST1H2ADP20671 130 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 CBSP35520 551 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 HSF2Q03933 536 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 PUDPQ08623 228 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 TPBGQ13641 420 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 SYT14P1Q58G82 188 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 CRB2Q5IJ48 1285 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 RAET1GQ6H3X3 334 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 MS4A15Q8N5U1 240 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 CHST14Q8NCH0 376 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 SLC9A6Q92581 669 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 MS4A3Q96HJ5 214 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 HIST1H2AHQ96KK5 128 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 ZNF578Q96N58 590 aaPredicted RBP17.63■□□□□ 0.41
SCARF1-202ENST00000348987 HIST1H2AJQ99878 128 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 H2AFJQ9BTM1 129 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 TMED9Q9BVK6 235 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 SUV39H2Q9H5I1 410 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 EXTL2Q9UBQ6 330 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms