RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 FUT5Q11128 374 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 FAHD1Q6P587 224 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 CEP68Q76N32 757 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 ZNF605Q86T29 641 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 OR4N5Q8IXE1 308 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 HS3ST5Q8IZT8 346 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 SMYD1Q8NB12 490 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 C7orf57Q8NEG2 295 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 GPR32P1Q8NGA4 272 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 ADAMTS15Q8TE58 950 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 COL26A1Q96A83 441 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 PIP5K1AQ99755 562 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 PSD2Q9BQI7 771 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 TOR3AQ9H497 397 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 SEC14L3Q9UDX4 400 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 FAM32AQ9Y421 112 aaKnown RBP16.72■□□□□ 0.27
RAB39A-201ENST00000320578 LYVE1Q9Y5Y7 322 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 U3KQV3 271 aa16.72■□□□□ 0.27
RAB39A-201ENST00000320578 TP53BP1Q12888 1972 aaPredicted RBP16.71■□□□□ 0.27
RAB39A-201ENST00000320578 CASC3O15234 703 aaKnown RBP16.71■□□□□ 0.27
RAB39A-201ENST00000320578 SLC16A6O15403 523 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 JRKO75564 520 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 MED26O95402 600 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 H6PDO95479 791 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 RECKO95980 971 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 ITGAMP11215 1152 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 RRM2P31350 389 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 MGAT2Q10469 447 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 MAP4K2Q12851 820 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 IL18R1Q13478 541 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 PUM1Q14671 1186 aaKnown RBP eCLIP16.71■□□□□ 0.27
RAB39A-201ENST00000320578 NR0B2Q15466 257 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 PRICKLE4Q2TBC4 344 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 YOD1Q5VVQ6 348 aaPredicted RBP16.71■□□□□ 0.27
RAB39A-201ENST00000320578 SLC44A2Q8IWA5 706 aaPredicted RBP16.71■□□□□ 0.27
RAB39A-201ENST00000320578 OR4C15Q8NGM1 316 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 COL21A1Q96P44 957 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 AMBRA1Q9C0C7 1298 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 FAM118AQ9NWS6 357 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 KCND3Q9UK17 655 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 PCDHGB5Q9Y5G0 923 aa16.71■□□□□ 0.27
RAB39A-201ENST00000320578 TMEM221A6NGB7 291 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 FAM227AF5H4B4 570 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 M0R296 226 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 TNFRSF11BO00300 401 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 CLDN4O14493 209 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 HS6ST1O60243 411 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 LDB3O75112 727 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 DIRAS1O95057 198 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 CHRM4P08173 479 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 CDH2P19022 906 aaPredicted RBP16.7■□□□□ 0.26
RAB39A-201ENST00000320578 GCGRP47871 477 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 HLA-BQ31612 363 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 AP1ARQ63HQ0 302 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 FAM111BQ6SJ93 734 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 DTWD2Q8NBA8 298 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 ZNF555Q8NEP9 628 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 PIGKQ92643 395 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 HOXB13Q92826 284 aaPredicted RBP16.7■□□□□ 0.26
RAB39A-201ENST00000320578 PMM1Q92871 262 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 SLC35A4Q96G79 324 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 MBOAT4Q96T53 435 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 STACQ99469 402 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 MAT2BQ9NZL9 334 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 PDP1Q9P0J1 537 aaPredicted RBP16.7■□□□□ 0.26
RAB39A-201ENST00000320578 MYRFQ9Y2G1 1151 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 SH3GLB1Q9Y371 365 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 CACNA1EQ15878 2313 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 SCN3AQ9NY46 2000 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 ARRDC5A6NEK1 342 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 H3BNH8 94 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 SYT5O00445 386 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 GNAO1P09471 354 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 PRKACGP22612 351 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 IGFBP5P24593 272 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 CSF2RBP32927 897 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 GALNSP34059 522 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 PTGER1P34995 402 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 OR1E2P47887 323 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 LIMS1P48059 325 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 ARL4DP49703 201 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 DAPP51397 102 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 HSD17B7P56937 341 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 KCTD21Q4G0X4 260 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 CDRT4Q8N9R6 151 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 PIK3C3Q8NEB9 887 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 FKBP10Q96AY3 582 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 DPYSL5Q9BPU6 564 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 YIPF4Q9BSR8 244 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 PINK1Q9BXM7 581 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 SPRTNQ9H040 489 aaPredicted RBP16.7■□□□□ 0.26
RAB39A-201ENST00000320578 PIGUQ9H490 435 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 CAPN10Q9HC96 672 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 DUSP22Q9NRW4 184 aa16.7■□□□□ 0.26
RAB39A-201ENST00000320578 TRIM64A6NGJ6 449 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 AK1P00568 194 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 NELFEP18615 380 aaKnown RBP16.69■□□□□ 0.26
RAB39A-201ENST00000320578 NT5EP21589 574 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 MAP3K8P41279 467 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 PPP1R8Q12972 351 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms