RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 SORCS1Q8WY21 1168 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 SUCNR1Q9BXA5 334 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 PLEKHJ1Q9NW61 149 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 NTSR2O95665 410 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 RPS13P62277 151 aaKnown RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 SLC18B1Q6NT16 456 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 GPR142Q7Z601 462 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 MAGEH1Q9H213 219 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 SERTAD3Q9UJW9 196 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 AOC1P19801 751 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 CHRNB4P30926 498 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF718Q3SXZ3 478 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 PAQR3Q6TCH7 311 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 OR8K5Q8NH50 307 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 SLC32A1Q9H598 525 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 ACTR3BQ9P1U1 418 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 LGALS13Q9UHV8 139 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 SPTBN1Q01082 2364 aaKnown RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 RPL11P62913 178 aaKnown RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 MEDAGQ5VYS4 303 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 FJX1Q86VR8 437 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 NPAS3Q8IXF0 933 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 SLC7A5P1Q8MH63 180 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 TAS2R16Q9NYV7 291 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 KLHL42Q9P2K6 505 aa12.83□□□□□ -0.36
TRIM56-201ENST00000306085 MAFBQ9Y5Q3 323 aaPredicted RBP12.83□□□□□ -0.36
TRIM56-201ENST00000306085 CHD2O14647 1828 aaKnown RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 CEBPZOSA8MTT3 80 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 IMPDH1P20839 514 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 C6orf141Q5SZD1 244 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 HGSNATQ68CP4 663 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 DCUN1D3Q8IWE4 304 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF514Q96K75 400 aaPredicted RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 SRA1Q9HD15 236 aaKnown RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 MRPL22Q9NWU5 206 aaKnown RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 FBXO7Q9Y3I1 522 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 DVL2O14641 736 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 CYTIPO60759 359 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 ADORA3P0DMS8 318 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 HTR7P34969 479 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 THBS3P49746 956 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 TAS2R31P59538 309 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 LCN10Q6JVE6 187 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 INPP4AQ96PE3 977 aaPredicted RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 IL17RBQ9NRM6 502 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 SEC14L2O76054 403 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 SIX3O95343 332 aaPredicted RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 GABRA3P34903 492 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 OR51A7Q8NH64 312 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 C10orf82Q8WW14 230 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 IL1F10Q8WWZ1 152 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 SPIN2AQ99865 258 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 SPIN2BQ9BPZ2 258 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 GTF2BQ00403 316 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 SLAMF1Q13291 335 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 PDLIM3Q53GG5 364 aaPredicted RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 GPR137CQ8N3F9 429 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 FAM160A2Q8N612 972 aaPredicted RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 NATD1Q8N6N6 113 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 KCNH6Q9H252 994 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 OR12D1P0DN82 309 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 NDST2P52849 883 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 BIDP55957 195 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 GPX6P59796 221 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 ZNRF4Q8WWF5 429 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 HNRNPABQ99729 332 aaKnown RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 G6PC3Q9BUM1 346 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 HDHD5Q9BXW7 423 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 KLRG2A4D1S0 409 aaPredicted RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 PRAMEF2O60811 474 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 CLCNKBP51801 687 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 BPHLQ86WA6 291 aaPredicted RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 IL25Q9H293 177 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 OXSMQ9NWU1 459 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 J3QR89 54 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 GGT5P36269 586 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 GPR4P46093 362 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 APOFQ13790 326 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 IFNL1Q8IU54 200 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 FKBP10Q96AY3 582 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 MCHR1Q99705 422 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 CNTNAP3Q9BZ76 1288 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF436Q9C0F3 470 aaPredicted RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 MYOCOSA0A1B0GUC4 107 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 NPC1O15118 1278 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 PTBP3O95758 552 aaKnown RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 TAS2R30P59541 319 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 GHRHRQ02643 423 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 KIAA1211LQ6NV74 962 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 NR4A3Q92570 626 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 SNAPC3Q92966 411 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 TMEM248Q9NWD8 314 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 LUZP4Q9P127 313 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 MEIS3P1A6NDR6 274 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
TRIM56-201ENST00000306085 PITPNBP48739 271 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 SLC22A25Q6T423 547 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 SLC19A3Q9BZV2 496 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms