RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ULBP3Q9BZM4 244 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 SPRY4Q9C004 299 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 TRIM15Q9C019 465 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 OR51I1Q9H343 314 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 C14orf105Q9NVL8 296 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 PCDHGA3Q9Y5H0 932 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 WDFY3Q8IZQ1 3526 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 PLD2O14939 933 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 CNOT3O75175 753 aaKnown RBP23■■□□□ 1.27
GTF2A1-201ENST00000298173 KRT36O76013 467 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 CBX7O95931 251 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 ARAFP10398 606 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 AGXTP21549 392 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 PCGF2P35227 344 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 PRIM2P49643 509 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 MAPK10P53779 464 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 POLE2P56282 527 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 TXNL4AP83876 142 aaKnown RBP23■■□□□ 1.27
GTF2A1-201ENST00000298173 SZRD1Q7Z422 152 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 VWA5B2Q8N398 1253 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 FKBP10Q96AY3 582 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 NSMCE2Q96MF7 247 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 MS4A4EQ96PG1 132 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 DCLRE1BQ9H816 532 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 S100A14Q9HCY8 104 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 THUMPD1Q9NXG2 353 aaKnown RBP23■■□□□ 1.27
GTF2A1-201ENST00000298173 IFT80Q9P2H3 777 aaPredicted RBP23■■□□□ 1.27
GTF2A1-201ENST00000298173 MKL2Q9ULH7 1088 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 GVINP1Q7Z2Y8 2422 aa22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 KLK3P07288 261 aaPredicted RBP22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 TFPTP0C1Z6 253 aa22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 MYBPC3Q14896 1274 aa22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 MAPK11Q15759 364 aa22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 ZNF630Q2M218 657 aaPredicted RBP22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 MFSD4BQ5TF39 518 aa22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 MFSD12Q6NUT3 480 aa22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 PTPMT1Q8WUK0 201 aaPredicted RBP22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 RAB8BQ92930 207 aa22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 STMN2Q93045 179 aa22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 ZNF578Q96N58 590 aaPredicted RBP22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 ACTRT3Q9BYD9 372 aa22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 A4GALTQ9NPC4 353 aa22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 PISDQ9UG56 409 aa22.99■■□□□ 1.27
GTF2A1-201ENST00000298173 PRAMEF27A3QJZ7 478 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 GMNNO75496 209 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 GCM2O75603 506 aaPredicted RBP22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 JMJD7P0C870 316 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 OR12D1P0DN82 309 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 CEACAM1P13688 526 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 MRPS22P82650 360 aaKnown RBP22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 CDK6Q00534 326 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 FUT7Q11130 342 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 DUSP8Q13202 625 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 MTX3Q5HYI7 312 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 TMEM151BQ8IW70 566 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 LGI4Q8N135 537 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 OR5D16Q8NGK9 328 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 WDR36Q8NI36 951 aaKnown RBP22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 SLC38A5Q8WUX1 472 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 PYDC1Q8WXC3 89 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 SPSB2Q99619 263 aa22.98■■□□□ 1.27
GTF2A1-201ENST00000298173 ASNA1O43681 348 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 NME6O75414 186 aaPredicted RBP22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 KDELR2P33947 212 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 MAP3K8P41279 467 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 NSDHLQ15738 373 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 ZCCHC12Q6PEW1 402 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 PRSS58Q8IYP2 241 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 ENDOVQ8N8Q3 282 aaKnown RBP22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 HOXB13Q92826 284 aaPredicted RBP22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 YIPF4Q9BSR8 244 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 DCAF13Q9NV06 445 aaKnown RBP22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 PCDHGA8Q9Y5G5 932 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 SYNDIG1LA6NDD5 238 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 C9orf172C9J069 976 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 H3BNX3 289 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 HRKO00198 91 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 IFNA16P05015 189 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 KHKP50053 298 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 SCARB2Q14108 478 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 EXOSC7Q15024 291 aaKnown RBP22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 CDC73Q6P1J9 531 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 CCDC80Q76M96 950 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 SLCO4A1Q96BD0 722 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 OR7D2Q96RA2 312 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 WDR54Q9H977 334 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 RNPEPL1Q9HAU8 725 aa22.97■■□□□ 1.27
GTF2A1-201ENST00000298173 UMPSP11172 480 aa22.96■■□□□ 1.27
GTF2A1-201ENST00000298173 ANXA11P50995 505 aaKnown RBP22.96■■□□□ 1.27
GTF2A1-201ENST00000298173 PCBP3P57721 371 aaKnown RBP22.96■■□□□ 1.27
GTF2A1-201ENST00000298173 FOXL2P58012 376 aa22.96■■□□□ 1.27
GTF2A1-201ENST00000298173 MAP7Q14244 749 aa22.96■■□□□ 1.27
GTF2A1-201ENST00000298173 ZNF267Q14586 743 aaPredicted RBP22.96■■□□□ 1.27
GTF2A1-201ENST00000298173 MLIPQ5VWP3 458 aa22.96■■□□□ 1.27
GTF2A1-201ENST00000298173 ZFP1Q6P2D0 407 aa22.96■■□□□ 1.27
GTF2A1-201ENST00000298173 FAM199XQ6PEV8 388 aaPredicted RBP22.96■■□□□ 1.27
GTF2A1-201ENST00000298173 SHISA6Q6ZSJ9 500 aa22.96■■□□□ 1.27
GTF2A1-201ENST00000298173 METTL25Q8N6Q8 603 aa22.96■■□□□ 1.27
GTF2A1-201ENST00000298173 GALNT6Q8NCL4 622 aa22.96■■□□□ 1.27
GTF2A1-201ENST00000298173 NFKBIDQ8NI38 313 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms