RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 EXPH5Q8NEV8 1989 aa8.46□□□□□ -1.05
HMGN1-201ENST00000288344 DIDO1Q9BTC0 2240 aaKnown RBP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 PINLYPA6NC86 204 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 OR6C76A6NM76 312 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 EIF1AYO14602 144 aaKnown RBP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 ZNF195O14628 629 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 PLOD3O60568 738 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 GUCY1B2O75343 617 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 LYPLA1O75608 230 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 SERPINE1P05121 402 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 IFI6P09912 130 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 LINC00032P0C843 101 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 SDC1P18827 310 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 TNNI3P19429 210 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 CSNK2A2P19784 350 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 GNLYP22749 145 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 PIK3R1P27986 724 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 FEN1P39748 380 aaKnown RBP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 ARL1P40616 181 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 SOX3P41225 446 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 CYB561P49447 251 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 NR0B1P51843 470 aaKnown RBP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 ERVK-8P63133 956 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 PLIN5Q00G26 463 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 SRSF11Q05519 484 aaKnown RBP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 BTKQ06187 659 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 ASPHQ12797 758 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 ZNF267Q14586 743 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 HYAL4Q2M3T9 481 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 EXOSC6Q5RKV6 272 aaKnown RBP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 C6orf136Q5SQH8 315 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 MYO7BQ6PIF6 2116 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 FGD2Q7Z6J4 655 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 GPALPP1Q8IXQ4 340 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 SLC15A4Q8N697 577 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 CCDC63Q8NA47 563 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 ST6GALNAC3Q8NDV1 305 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 C17orf47Q8NEP4 570 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 OR7G1Q8NGA0 311 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 THAP3Q8WTV1 239 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 RNF138Q8WVD3 245 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 TWIST2Q8WVJ9 160 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 NR4A3Q92570 626 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 TP53INP1Q96A56 240 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 WWTR1Q9GZV5 400 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 ILKAPQ9H0C8 392 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-201ENST00000288344 WDR41Q9HAD4 459 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 SLC35C2Q9NQQ7 365 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 ERVK-19Q9WJR5 959 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 ZNF835Q9Y2P0 537 aa8.46□□□□□ -1.06
HMGN1-201ENST00000288344 TMEM120BA0PK00 339 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 WDR91A4D1P6 747 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 TMEM114B3SHH9 223 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 WWP2O00308 870 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 PLOD2O00469 737 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 PIP5K1BO14986 540 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 ANKRD28O15084 1053 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 TO15178 435 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 ERLIN1O75477 346 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 SLC25A12O75746 678 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 SASH3O75995 380 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 GLSO94925 669 aaPredicted RBP8.45□□□□□ -1.06
HMGN1-201ENST00000288344 RNF224P0DH78 156 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 CT45A8P0DMV1 189 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 CT45A9P0DMV2 189 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 BCKDHAP12694 445 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 EDN3P14138 238 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 PCSK2P16519 638 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 BGNP21810 368 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 GPX3P22352 226 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 GRK2P25098 689 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 PTGER1P34995 402 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 C21orf58P58505 322 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 ABCE1P61221 599 aaKnown RBP8.45□□□□□ -1.06
HMGN1-201ENST00000288344 MAGOHP61326 146 aaKnown RBP8.45□□□□□ -1.06
HMGN1-201ENST00000288344 PMP22Q01453 160 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 ZNF763Q0D2J5 394 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 C2orf80Q0P641 193 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 BST1Q10588 318 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 MRPL49Q13405 166 aaKnown RBP8.45□□□□□ -1.06
HMGN1-201ENST00000288344 UBAP2LQ14157 1087 aaKnown RBP8.45□□□□□ -1.06
HMGN1-201ENST00000288344 HEPACAMQ14CZ8 416 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 LTB4RQ15722 352 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 ZNF385BQ569K4 471 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 TTMPQ5BVD1 217 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 CT45A2Q5DJT8 189 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 AGBL2Q5U5Z8 902 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 IKBIPQ70UQ0 350 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 GALNTL5Q7Z4T8 443 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 SULF2Q8IWU5 870 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 ZNF781Q8N8C0 355 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 GOLM1Q8NBJ4 401 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 OR5L2Q8NGL0 311 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 PAQR8Q8TEZ7 354 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 NUDT8Q8WV74 236 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 ERP27Q96DN0 273 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 VSTM2LQ96N03 204 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 CCT7Q99832 543 aa8.45□□□□□ -1.06
HMGN1-201ENST00000288344 FAIM2Q9BWQ8 316 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms