RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ZNF184Q99676 751 aaPredicted RBP23.06■■□□□ 1.28
SSBP4-201ENST00000270061 SLC25A18Q9H1K4 315 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 RAD21L1Q9H4I0 556 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 NEUROD4Q9HD90 331 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 SLAMF7Q9NQ25 335 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 OLAHQ9NV23 265 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 TCFL5Q9UL49 500 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 ATG4BQ9Y4P1 393 aa23.06■■□□□ 1.28
SSBP4-201ENST00000270061 PROM1O43490 865 aa23.05■■□□□ 1.28
SSBP4-201ENST00000270061 UQCRC2P22695 453 aa23.05■■□□□ 1.28
SSBP4-201ENST00000270061 MVDP53602 400 aa23.05■■□□□ 1.28
SSBP4-201ENST00000270061 MANFP55145 182 aaKnown RBP23.05■■□□□ 1.28
SSBP4-201ENST00000270061 IL10RAQ13651 578 aa23.05■■□□□ 1.28
SSBP4-201ENST00000270061 VEZF1Q14119 521 aa23.05■■□□□ 1.28
SSBP4-201ENST00000270061 ADRM1Q16186 407 aa23.05■■□□□ 1.28
SSBP4-201ENST00000270061 TCTE1Q5JU00 501 aa23.05■■□□□ 1.28
SSBP4-201ENST00000270061 ABHD13Q7L211 337 aa23.05■■□□□ 1.28
SSBP4-201ENST00000270061 ZNF605Q86T29 641 aa23.05■■□□□ 1.28
SSBP4-201ENST00000270061 SERINC2Q96SA4 455 aa23.05■■□□□ 1.28
SSBP4-201ENST00000270061 STARD5Q9NSY2 213 aa23.05■■□□□ 1.28
SSBP4-201ENST00000270061 DCAF13Q9NV06 445 aaKnown RBP23.05■■□□□ 1.28
SSBP4-201ENST00000270061 B8ZZF3 427 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 TIPRLO75663 272 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 KRT75O95678 551 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 BMP2P12643 396 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 HOXB6P17509 224 aaKnown RBP23.04■■□□□ 1.28
SSBP4-201ENST00000270061 ZNF10P21506 573 aaPredicted RBP23.04■■□□□ 1.28
SSBP4-201ENST00000270061 DCDP81605 110 aaKnown RBP23.04■■□□□ 1.28
SSBP4-201ENST00000270061 FADDQ13158 208 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 THAP4Q8WY91 577 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 FAM162AQ96A26 154 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 EXOSC8Q96B26 276 aaKnown RBP23.04■■□□□ 1.28
SSBP4-201ENST00000270061 UGT2B28Q9BY64 529 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 EPS8L2Q9H6S3 715 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 SLC35C2Q9NQQ7 365 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 GPATCH2Q9NW75 528 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 CES1P1Q9UKY3 287 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 PADI2Q9Y2J8 665 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 SRPX2O60687 465 aaPredicted RBP23.04■■□□□ 1.28
SSBP4-201ENST00000270061 ARSFP54793 590 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 TAF11Q15544 211 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 HMBOX1Q6NT76 420 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 PRDM9Q9NQV7 894 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 UTS2RQ9UKP6 389 aa23.04■■□□□ 1.28
SSBP4-201ENST00000270061 AIFM1O95831 613 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 ACADSP16219 412 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 ALAS2P22557 587 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 FASP25445 335 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 GRM7Q14831 915 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 MLIPQ5VWP3 458 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 TMEM214Q6NUQ4 689 aaKnown RBP23.03■■□□□ 1.28
SSBP4-201ENST00000270061 IZUMO2Q6UXV1 221 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 PDSS2Q86YH6 399 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 EID3Q8N140 333 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 ANKFN1Q8N957 763 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 FAM110BQ8TC76 370 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 PNPT1Q8TCS8 783 aaKnown RBP23.03■■□□□ 1.28
SSBP4-201ENST00000270061 UCN3Q969E3 161 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 PPWD1Q96BP3 646 aaKnown RBP23.03■■□□□ 1.28
SSBP4-201ENST00000270061 ZNF285Q96NJ3 590 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 CXorf36Q9H7Y0 433 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 AGPAT4Q9NRZ5 378 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 C5AR2Q9P296 337 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 IFT80Q9P2H3 777 aaPredicted RBP23.03■■□□□ 1.28
SSBP4-201ENST00000270061 GPN3Q9UHW5 284 aaPredicted RBP23.03■■□□□ 1.28
SSBP4-201ENST00000270061 FBXW2Q9UKT8 454 aa23.03■■□□□ 1.28
SSBP4-201ENST00000270061 CNOT11Q9UKZ1 510 aaKnown RBP23.03■■□□□ 1.28
SSBP4-201ENST00000270061 ATXN8OSP0DMR3 200 aa23.02■■□□□ 1.28
SSBP4-201ENST00000270061 RAP2AP10114 183 aa23.02■■□□□ 1.28
SSBP4-201ENST00000270061 ALOX12P18054 663 aa23.02■■□□□ 1.28
SSBP4-201ENST00000270061 VSX2P58304 361 aaPredicted RBP23.02■■□□□ 1.28
SSBP4-201ENST00000270061 LRRC36Q1X8D7 754 aa23.02■■□□□ 1.28
SSBP4-201ENST00000270061 NKAIN1Q4KMZ8 207 aa23.02■■□□□ 1.28
SSBP4-201ENST00000270061 FAM98BQ52LJ0 330 aaKnown RBP23.02■■□□□ 1.28
SSBP4-201ENST00000270061 FAM69BQ5VUD6 431 aa23.02■■□□□ 1.28
SSBP4-201ENST00000270061 YOD1Q5VVQ6 348 aaPredicted RBP23.02■■□□□ 1.28
SSBP4-201ENST00000270061 SLC48A1Q6P1K1 146 aa23.02■■□□□ 1.28
SSBP4-201ENST00000270061 TTLL10Q6ZVT0 673 aa23.02■■□□□ 1.28
SSBP4-201ENST00000270061 CLEC4FQ8N1N0 589 aa23.02■■□□□ 1.28
SSBP4-201ENST00000270061 MAPKAP1Q9BPZ7 522 aa23.02■■□□□ 1.28
SSBP4-201ENST00000270061 PHF11Q9UIL8 331 aa23.02■■□□□ 1.28
SSBP4-201ENST00000270061 TNFRSF21O75509 655 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 ATP6V1C1P21283 382 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 GCGRP47871 477 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 GRAMD1BQ3KR37 738 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.01■■□□□ 1.277e-7■■■■■ 53.6
SSBP4-201ENST00000270061 CSNK1A1LQ8N752 337 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 TTC29Q8NA56 475 aaPredicted RBP23.01■■□□□ 1.27
SSBP4-201ENST00000270061 NCLNQ969V3 563 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 ENAMQ9NRM1 1142 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 SIRT3Q9NTG7 399 aaPredicted RBP23.01■■□□□ 1.27
SSBP4-201ENST00000270061 KCMF1Q9P0J7 381 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 NDOR1Q9UHB4 597 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 DTNAQ9Y4J8 743 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 SLC22A7Q9Y694 548 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 A0A1B0GX78 115 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 MYO1GB0I1T2 1018 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 PGRMC2O15173 223 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 B3GALT2O43825 422 aa23.01■■□□□ 1.27
SSBP4-201ENST00000270061 CD63P08962 238 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms