RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 USP3Q9Y6I4 520 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 COL5A3P25940 1745 aaPredicted RBP11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 IGFALSP35858 605 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 PIGAP37287 484 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 RPS27LQ71UM5 84 aaKnown RBP11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 SMPDL3AQ92484 453 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 LGI1O95970 557 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 SPARCP09486 303 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 RGNQ15493 299 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 PRAMEF14Q5SWL7 426 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 TPRG1Q6ZUI0 275 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 DCUN1D3Q8IWE4 304 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 ARMC10Q8N2F6 343 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 MFSD4AQ8N468 514 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 HDDC3Q8N4P3 179 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 YIPF6Q96EC8 236 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 DCLRE1CQ96SD1 692 aaKnown RBP11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 WASH6PQ9NQA3 447 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 RBMXL2O75526 392 aaKnown RBP11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 TOXO94900 526 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 PFKMP08237 780 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 ZNF140P52738 457 aaPredicted RBP11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 TDGQ13569 410 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 C3orf30Q96M34 536 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 KXD1Q9BQD3 176 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 GAREM1Q9H706 876 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 COLEC10Q9Y6Z7 277 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 UNCXA6NJT0 531 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 ARPC5O15511 151 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 GPRIN2O60269 458 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 CD53P19397 219 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 SUOXP51687 545 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 SELENBP1Q13228 472 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 RBMS2Q15434 407 aaKnown RBP11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 DNM1P34Q6PK57 102 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 KLHDC8BQ8IXV7 354 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 CCDC120Q96HB5 630 aa11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 DIMT1Q9UNQ2 313 aaKnown RBP11.14□□□□□ -0.63
DNMT3A-201ENST00000264709 TPT1P13693 172 aaKnown RBP11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 DRD2P14416 443 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 SNRPD2P62316 118 aaKnown RBP11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 FAM110CQ1W6H9 321 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 HENMT1Q5T8I9 393 aaKnown RBP11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 XAF1Q6GPH4 301 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 SLC38A1Q9H2H9 487 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 TAF1LQ8IZX4 1826 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 PLSCR1O15162 318 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 ADH1CP00326 375 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 NDUFS1P28331 727 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 FNDC3BQ53EP0 1204 aaKnown RBP11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 GTF2IRD2BQ6EKJ0 949 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 ENPP7Q6UWV6 458 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 GTF2IRD2Q86UP8 949 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 YIPF4Q9BSR8 244 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 SAV1Q9H4B6 383 aaPredicted RBP11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 MAP10Q9P2G4 905 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 LDB2O43679 373 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 MEF2DQ14814 521 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 FAM214AQ32MH5 1076 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 LAX1Q8IWV1 398 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 SSX5O60225 188 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 VIPP01282 170 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 UCHL1P09936 223 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 GPX2P18283 190 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 TPMTP51580 245 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 BLOC1S1P78537 153 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 FRMPD2BQ6IN97 320 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 TMEM205Q6UW68 189 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 CFAP52Q8N1V2 620 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 CPPED1Q9BRF8 314 aaPredicted RBP11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 NMNAT1Q9HAN9 279 aaPredicted RBP11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 CORINQ9Y5Q5 1042 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 ABHD14A-ACY1A0A1B0GW23 586 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 FAM72CH0Y354 149 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 GRK6P43250 576 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 RAB5CP51148 216 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 FAM72AQ5TYM5 149 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 FAM72DQ6L9T8 149 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 FAM72BQ86X60 149 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 OR10Q1Q8NGQ4 319 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 SLC22A18Q96BI1 424 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 C11orf54Q9H0W9 315 aaPredicted RBP11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 DNTTIP1Q9H147 329 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 MARCH4Q9P2E8 410 aaPredicted RBP11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 PPM1BO75688 479 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 RGS11O94810 467 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 C6orf47O95873 294 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 HTR1AP08908 422 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 PSMB1P20618 241 aaKnown RBP11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 CERS1P27544 350 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 ADRA1AP35348 466 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 MAP3K8P41279 467 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 TAS2R31P59538 309 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 ZNF831Q5JPB2 1677 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 MLIPQ5VWP3 458 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 C7orf57Q8NEG2 295 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 SCAMP5Q8TAC9 235 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 OR51V1Q9H2C8 321 aa11.13□□□□□ -0.63
DNMT3A-201ENST00000264709 A0A0G2JLL6 359 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms