RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 BMXP51813 675 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 SLC51AQ86UW1 340 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 TMEM200AQ86VY9 491 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 KDM1BQ8NB78 822 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 GLB1L3Q8NCI6 653 aaPredicted RBP12.1□□□□□ -0.47
TCF4-248ENST00000616053 GNG12Q9UBI6 72 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 PLA2R1Q13018 1463 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 C4orf47A7E2U8 309 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 LILRB3O75022 631 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 ARHGEF15O94989 841 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 PRPS1L1P21108 318 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 VIPR2P41587 438 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 RPS24P62847 133 aaKnown RBP12.1□□□□□ -0.47
TCF4-248ENST00000616053 OVCH1Q7RTY7 1134 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 C1orf52Q8N6N3 182 aaKnown RBP12.1□□□□□ -0.47
TCF4-248ENST00000616053 OR2AP1Q8NGE2 309 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 PGM2Q96G03 612 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 HEPACAM2A8MVW5 462 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 SULT2B1O00204 365 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 CDH1P12830 882 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 LMAN2Q12907 356 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 NCEH1Q6PIU2 408 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 GPR155Q7Z3F1 870 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 NAT6Q93015 286 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 FAM46BQ96A09 425 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 MATN3O15232 486 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 SMIM17P0DL12 118 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 HNF1AP20823 631 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 MSX2P35548 267 aaPredicted RBP12.1□□□□□ -0.47
TCF4-248ENST00000616053 DEFB133Q30KQ1 61 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 LRIT3Q3SXY7 679 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 AGAP7PQ5VUJ5 663 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 AGAP6Q5VW22 663 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 NXPE4Q6UWF7 544 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 OR9A1PQ8NGU1 263 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 AGAP4Q96P64 663 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 TMEM14AQ9Y6G1 99 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 TCAPO15273 167 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 SDHBP21912 280 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 UQCRFS1P47985 274 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 CHRNA6Q15825 494 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 CCDC58Q4VC31 144 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 CFAP77Q6ZQR2 320 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 TRABD2AQ86V40 505 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 TMEM178AQ8NBL3 297 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 OR1J2Q8NGS2 313 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 MBOAT4Q96T53 435 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 KLHL9Q9P2J3 617 aa12.1□□□□□ -0.47
TCF4-248ENST00000616053 CAPN3P20807 821 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 DPP4P27487 766 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 HTR2AP28223 471 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 NFKBIDQ8NI38 313 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 MITD1Q8WV92 249 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 TXNL1O43396 289 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 CHRNA4P43681 627 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 ADARB1P78563 741 aaKnown RBP12.09□□□□□ -0.47
TCF4-248ENST00000616053 RAB33AQ14088 237 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 RAB35Q15286 201 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 BRICD5Q6PL45 260 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 Q6ZSR6 202 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 TWNKQ96RR1 684 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 SLC30A2Q9BRI3 323 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 CHRDQ9H2X0 955 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 SACM1LQ9NTJ5 587 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 NTSR1P30989 418 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 ADAMTS18Q8TE60 1221 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 GTF2H4Q92759 462 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 BARD1Q99728 777 aaKnown RBP12.09□□□□□ -0.47
TCF4-248ENST00000616053 DNAJC18Q9H819 358 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 CHST7Q9NS84 486 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 PLEKHJ1Q9NW61 149 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 SIT1Q9Y3P8 196 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 OR2M5A3KFT3 312 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 GMDSO60547 372 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 HLA-FP30511 346 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 PMPCAQ10713 525 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 COL28A1Q2UY09 1125 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 SLC26A9Q7LBE3 791 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 TOMM40LQ969M1 308 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 BOCQ9BWV1 1114 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 BARX1Q9HBU1 254 aaPredicted RBP12.09□□□□□ -0.47
TCF4-248ENST00000616053 TCAF1Q9Y4C2 921 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 FAM230AA0A1W2PPH8 454 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 TRBC2A0A5B9 178 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 C9JVG2 144 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 TRMUO75648 421 aaKnown RBP12.09□□□□□ -0.47
TCF4-248ENST00000616053 ATP6V1G2O95670 118 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 KNG1P01042 644 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 ICAM2P13598 275 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 HOXD11P31277 338 aaPredicted RBP12.09□□□□□ -0.47
TCF4-248ENST00000616053 CCNHP51946 323 aaPredicted RBP12.09□□□□□ -0.47
TCF4-248ENST00000616053 AKR1C1Q04828 323 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 DACT2Q5SW24 774 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 FAM83FQ8NEG4 500 aaPredicted RBP12.09□□□□□ -0.47
TCF4-248ENST00000616053 ZNF845Q96IR2 970 aaPredicted RBP12.09□□□□□ -0.47
TCF4-248ENST00000616053 F5H0A9 414 aaPredicted RBP12.09□□□□□ -0.47
TCF4-248ENST00000616053 BANF1O75531 89 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 APOA2P02652 100 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 FABP1P07148 127 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 F8A1P23610 371 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms