RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 CPPED1Q9BRF8 314 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 TCEAL7Q9BRU2 100 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 INPP5KQ9BT40 448 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 DPH7Q9BTV6 452 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CNPPD1Q9BV87 410 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MND1Q9BWT6 205 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 BBS2Q9BXC9 721 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 BEX2Q9BXY8 128 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CPEB1Q9BZB8 566 aaKnown RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 BCL2L14Q9BZR8 327 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 RAB6CQ9H0N0 254 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 POLR3FQ9H1D9 316 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SAV1Q9H4B6 383 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 NXF3Q9H4D5 531 aaKnown RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ACTL8Q9H568 366 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ELOVL6Q9H5J4 265 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ESRP2Q9H6T0 727 aaKnown RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 RNF167Q9H6Y7 350 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SEBOXQ9HB31 216 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 GALNT9Q9HCQ5 603 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 PTPRHQ9HD43 1115 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC35C2Q9NQQ7 365 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 GSN-AS1Q9NRJ2 163 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 GPR27Q9NS67 375 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 EXD2Q9NVH0 621 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 MRPS18AQ9NVS2 196 aaKnown RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 NDUFB11Q9NX14 153 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 BABAM2Q9NXR7 383 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 VNN3Q9NY84 501 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CD274Q9NZQ7 290 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 PDP1Q9P0J1 537 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 VAPAQ9P0L0 249 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 KLHL8Q9P2G9 620 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 EXTL2Q9UBQ6 330 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 DUX4Q9UBX2 424 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 TCEAL9Q9UHQ7 104 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 FEM1BQ9UK73 627 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF490Q9ULM2 529 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 POFUT2Q9Y2G5 429 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 CCL27Q9Y4X3 112 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 NUBP2Q9Y5Y2 271 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 ANKRD31Q8N7Z5 1873 aa3.86□□□□□ -1.79
HMGB1P50-201ENST00000605814 IGKV6D-21A0A0A0MT36 114 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 A0A0U1RQF3 1178 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 A0A1B0GTQ1 180 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 C17orf113A0A1B0GUU1 675 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 TRDV1A0A1B0GX56 115 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 ZNF729A6NN14 1252 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 HMSDA8MTL9 139 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 LINC00587B1AMM8 73 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 E9PAM4 449 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 M0QYV0 167 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 M0R233 179 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 FZD9O00144 591 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 KCNK1O00180 336 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 DFFAO00273 331 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 SULT1C2O00338 296 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 GPR171O14626 319 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 SYN3O14994 580 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 PER2O15055 1255 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 PRKYO43930 277 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 MFSD11O43934 449 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 TPST2O60704 377 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 PRAF2O60831 178 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 KERAO60938 352 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 AQP8O94778 261 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR2A4O95047 310 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 RASGRP1O95267 797 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 CFDP00746 253 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 SERPINA1P01009 418 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 EPOP01588 193 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 IGHV2-70P01814 119 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 CSF2P04141 144 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 CYP17A1P05093 508 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 ICAM1P05362 532 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 FABP3P05413 133 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 NMBP08949 121 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 HIST1H2AGP0C0S8 130 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 CYP4B1P13584 511 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 ARSAP15289 507 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 GOT1P17174 413 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 GPX2P18283 190 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 LAG3P18627 525 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 TSPAN8P19075 237 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 HIST1H2ADP20671 130 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 FDXRP22570 491 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 DNASE1P24855 282 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 ITGB8P26012 769 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 APEX1P27695 318 aaKnown RBP3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 KDELR2P33947 212 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 AVPR1AP37288 418 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 RFC3P40938 356 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC1A2P43004 574 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 STK19P49842 368 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 FOXA1P55317 472 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 EEF1A1P68104 462 aaKnown RBP3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 UBXN2AP68543 259 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 SHC2P98077 582 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 ACVR1Q04771 509 aa3.85□□□□□ -1.79
HMGB1P50-201ENST00000605814 CSTF1Q05048 431 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms