RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 DNAJC14Q6Y2X3 702 aaPredicted RBP20.42■□□□□ 0.86
LTBP4-224ENST00000599016 ZNF248Q8NDW4 579 aa20.42■□□□□ 0.86
LTBP4-224ENST00000599016 SFXN5Q8TD22 340 aa20.42■□□□□ 0.86
LTBP4-224ENST00000599016 KAT2AQ92830 837 aa20.42■□□□□ 0.86
LTBP4-224ENST00000599016 ELP4Q96EB1 424 aa20.42■□□□□ 0.86
LTBP4-224ENST00000599016 LPAR4Q99677 370 aa20.42■□□□□ 0.86
LTBP4-224ENST00000599016 PAIP1Q9H074 479 aaKnown RBP20.42■□□□□ 0.86
LTBP4-224ENST00000599016 CXorf36Q9H7Y0 433 aa20.42■□□□□ 0.86
LTBP4-224ENST00000599016 IL1RL2Q9HB29 575 aa20.42■□□□□ 0.86
LTBP4-224ENST00000599016 NDE1Q9NXR1 346 aa20.42■□□□□ 0.86
LTBP4-224ENST00000599016 MAT2BQ9NZL9 334 aa20.42■□□□□ 0.86
LTBP4-224ENST00000599016 PTGFRNQ9P2B2 879 aa20.42■□□□□ 0.86
LTBP4-224ENST00000599016 MAP10Q9P2G4 905 aa20.42■□□□□ 0.86
LTBP4-224ENST00000599016 LOC400499M0QZD8 3231 aa20.42■□□□□ 0.86
LTBP4-224ENST00000599016 LOC102723996A0A087X1L8 192 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 PLOD2O00469 737 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 EMC8O43402 210 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 HNRNPCL1O60812 293 aaKnown RBP20.41■□□□□ 0.86
LTBP4-224ENST00000599016 KRT16P08779 473 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 T-ENOLP0DO92 83 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 LIFP15018 202 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 PTGER1P34995 402 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 CDKN2CP42773 168 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 CCT3P49368 545 aaKnown RBP20.41■□□□□ 0.86
LTBP4-224ENST00000599016 PGDP52209 483 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 PRR5P85299 388 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 EEF1A2Q05639 463 aaKnown RBP20.41■□□□□ 0.86
LTBP4-224ENST00000599016 BNIP1Q12981 228 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 CLN3Q13286 438 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 ZNF267Q14586 743 aaPredicted RBP20.41■□□□□ 0.86
LTBP4-224ENST00000599016 COL28A1Q2UY09 1125 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 BHLHB9Q6PI77 547 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 FAM111BQ6SJ93 734 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 HACD2Q6Y1H2 254 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 TMEM64Q6YI46 380 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 DGAT2L6Q6ZPD8 337 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 VWA5B2Q8N398 1253 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 PTPMT1Q8WUK0 201 aaPredicted RBP20.41■□□□□ 0.86
LTBP4-224ENST00000599016 KCNE4Q8WWG9 221 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 SIRT3Q9NTG7 399 aaPredicted RBP20.41■□□□□ 0.86
LTBP4-224ENST00000599016 DDX18Q9NVP1 670 aaKnown RBP20.41■□□□□ 0.86
LTBP4-224ENST00000599016 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.41■□□□□ 0.86
LTBP4-224ENST00000599016 IL17BQ9UHF5 180 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 MRPS18BQ9Y676 258 aaKnown RBP20.41■□□□□ 0.86
LTBP4-224ENST00000599016 FREM2Q5SZK8 3169 aa20.41■□□□□ 0.86
LTBP4-224ENST00000599016 A0A087WV62 115 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 SAGE2PA6NJ88 616 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 B2RBV5 119 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 PLOD3O60568 738 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 CREG1O75629 220 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 BCAS2O75934 225 aaPredicted RBP20.4■□□□□ 0.86
LTBP4-224ENST00000599016 CHI3L1P36222 383 aaPredicted RBP20.4■□□□□ 0.86
LTBP4-224ENST00000599016 MC3RP41968 323 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 MRPS35P82673 323 aaKnown RBP20.4■□□□□ 0.86
LTBP4-224ENST00000599016 PAPD4Q6PIY7 484 aaKnown RBP20.4■□□□□ 0.86
LTBP4-224ENST00000599016 DLEU7Q6UYE1 221 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 SZRD1Q7Z422 152 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 MORN4Q8NDC4 146 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 OR56A1Q8NGH5 318 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 C8orf44Q96CB5 159 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 MAGED4Q96JG8 741 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 IP6K3Q96PC2 410 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 PHF12Q96QT6 1004 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 CGREF1Q99674 301 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 CNPPD1Q9BV87 410 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 CCDC86Q9H6F5 360 aaKnown RBP20.4■□□□□ 0.86
LTBP4-224ENST00000599016 SLAMF8Q9P0V8 285 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 DKK4Q9UBT3 224 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 PCDHB14Q9Y5E9 798 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 HS3ST3B1Q9Y662 390 aa20.4■□□□□ 0.86
LTBP4-224ENST00000599016 SETXQ7Z333 2677 aaKnown RBP20.4■□□□□ 0.86
LTBP4-224ENST00000599016 IGHV3-20A0A0C4DH32 117 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 RNF103-CHMP3A0A140T963 221 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 CT62P0C5K7 136 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 PPIBP23284 216 aaKnown RBP20.39■□□□□ 0.85
LTBP4-224ENST00000599016 RASSF2P50749 326 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 MGAT2Q10469 447 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 TRMT12Q53H54 448 aaKnown RBP20.39■□□□□ 0.85
LTBP4-224ENST00000599016 PPP1R32Q7Z5V6 425 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 VASH2Q86V25 355 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 OR7G2Q8NG99 324 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 SNIP1Q8TAD8 396 aaKnown RBP20.39■□□□□ 0.85
LTBP4-224ENST00000599016 DOK4Q8TEW6 326 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 CTHRC1Q96CG8 243 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 LRRC58Q96CX6 371 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 FAM120BQ96EK7 910 aaKnown RBP20.39■□□□□ 0.85
LTBP4-224ENST00000599016 HOPXQ9BPY8 73 aaPredicted RBP20.39■□□□□ 0.85
LTBP4-224ENST00000599016 SLC35A5Q9BS91 424 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 DPH1Q9BZG8 443 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 ZNF700Q9H0M5 742 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 ZCCHC3Q9NUD5 404 aaKnown RBP20.39■□□□□ 0.85
LTBP4-224ENST00000599016 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.39■□□□□ 0.855e-8■□□□□ 11
LTBP4-224ENST00000599016 COPS7AQ9UBW8 275 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 BCAP29Q9UHQ4 241 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 C19orf53Q9UNZ5 99 aaPredicted RBP20.39■□□□□ 0.85
LTBP4-224ENST00000599016 ERVK-11Q9UQG0 969 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 ERVK-19Q9WJR5 959 aa20.39■□□□□ 0.85
LTBP4-224ENST00000599016 PEX12O00623 359 aa20.38■□□□□ 0.85
LTBP4-224ENST00000599016 SOCS6O14544 535 aa20.38■□□□□ 0.85
LTBP4-224ENST00000599016 TLX3O43711 291 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms