RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 H3BN98 237 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 OSMP13725 252 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 NTSR1P30989 418 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 IFITM3Q01628 133 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 TEKQ02763 1124 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 ARMCX4Q5H9R4 360 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 TPRG1LQ5T0D9 272 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 MRM1Q6IN84 353 aaKnown RBP21.41■■□□□ 1.02
SRRM1-222ENST00000596378 CCL4L1Q8NHW4 92 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 DHRS1Q96LJ7 313 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 WDR12Q9GZL7 423 aaKnown RBP21.41■■□□□ 1.02
SRRM1-222ENST00000596378 OR51E2Q9H255 320 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 ENOPH1Q9UHY7 261 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 B3GNT3Q9Y2A9 372 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 PCDHGA4Q9Y5G9 962 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 A0A1W2PQF6 199 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 TLR4O00206 839 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 ENTPD6O75354 484 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 HNRNPCP07910 306 aaKnown RBP eCLIP21.4■■□□□ 1.025e-7■■■■□ 20.8
SRRM1-222ENST00000596378 TARDBPQ13148 414 aaKnown RBP eCLIP21.4■■□□□ 1.02
SRRM1-222ENST00000596378 IRF3Q14653 427 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 BCDIN3DQ7Z5W3 292 aaKnown RBP21.4■■□□□ 1.02
SRRM1-222ENST00000596378 IL17RCQ8NAC3 791 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 FAM46DQ8NEK8 389 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 EQTNQ9NQ60 294 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 TBCCD1Q9NVR7 557 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 DNAJC27Q9NZQ0 273 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 DOLKQ9UPQ8 538 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 BTN3A3O00478 584 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 FAAHO00519 579 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 UGT2B17O75795 530 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 PPP2R1BP30154 601 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 TNFRSF4P43489 277 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 KHKP50053 298 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 KCT2Q8NC54 265 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 FBXO8Q9NRD0 319 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 CLN6Q9NWW5 311 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 ACAD8Q9UKU7 415 aa21.4■■□□□ 1.02
SRRM1-222ENST00000596378 HOXB2P14652 356 aa21.39■■□□□ 1.02
SRRM1-222ENST00000596378 UGT2B15P54855 530 aa21.39■■□□□ 1.02
SRRM1-222ENST00000596378 TMEM31Q5JXX7 168 aa21.39■■□□□ 1.02
SRRM1-222ENST00000596378 PODNL1Q6PEZ8 512 aa21.39■■□□□ 1.02
SRRM1-222ENST00000596378 ZNF554Q86TJ5 538 aa21.39■■□□□ 1.02
SRRM1-222ENST00000596378 IQCF1Q8N6M8 205 aa21.39■■□□□ 1.02
SRRM1-222ENST00000596378 OR6T1Q8NGN1 323 aa21.39■■□□□ 1.02
SRRM1-222ENST00000596378 RASSF5Q8WWW0 418 aa21.39■■□□□ 1.02
SRRM1-222ENST00000596378 OR1E3Q8WZA6 343 aa21.39■■□□□ 1.02
SRRM1-222ENST00000596378 CDCA3Q99618 268 aaPredicted RBP21.39■■□□□ 1.02
SRRM1-222ENST00000596378 FUZQ9BT04 418 aa21.39■■□□□ 1.02
SRRM1-222ENST00000596378 PRR14Q9BWN1 585 aa21.39■■□□□ 1.02
SRRM1-222ENST00000596378 MGAT4BQ9UQ53 548 aa21.39■■□□□ 1.02
SRRM1-222ENST00000596378 ZW10O43264 779 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 KLF8O95600 359 aaPredicted RBP21.39■■□□□ 1.01
SRRM1-222ENST00000596378 ASGR2P07307 311 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 CMPK1P30085 196 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 AHRP35869 848 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 BUD31P41223 144 aaPredicted RBP21.39■■□□□ 1.01
SRRM1-222ENST00000596378 XKP51811 444 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 ABATP80404 500 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 MED22Q15528 200 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 ATAT1Q5SQI0 421 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 ENPP7Q6UWV6 458 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 MEX3DQ86XN8 651 aaKnown RBP21.39■■□□□ 1.01
SRRM1-222ENST00000596378 KRT73Q86Y46 540 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 OR9A2Q8NGT5 310 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 OR2M4Q96R27 311 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 C1QTNF7Q9BXJ2 289 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 POLR2J3Q9H1A7 115 aaKnown RBP21.39■■□□□ 1.01
SRRM1-222ENST00000596378 CES1P1Q9UKY3 287 aa21.39■■□□□ 1.01
SRRM1-222ENST00000596378 EGFP01133 1207 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 CHRM5P08912 532 aaPredicted RBP21.38■■□□□ 1.01
SRRM1-222ENST00000596378 DBTP11182 482 aaKnown RBP21.38■■□□□ 1.01
SRRM1-222ENST00000596378 MC3RP41968 323 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 GPAT3Q53EU6 434 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 TJAP1Q5JTD0 557 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 AMIGO1Q86WK6 493 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 LSRQ86X29 649 aaPredicted RBP21.38■■□□□ 1.01
SRRM1-222ENST00000596378 MCFD2Q8NI22 146 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 LCN9Q8WX39 176 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 S100ZQ8WXG8 99 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 TSACCQ96A04 125 aaPredicted RBP21.38■■□□□ 1.01
SRRM1-222ENST00000596378 FAM131CQ96AQ9 280 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 CENPOQ9BU64 300 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 ENTPD4Q9Y227 616 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 CBFA2T3O75081 653 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 F3P13726 295 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 TNNI3P19429 210 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 RGS6P49758 472 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 BTN3A2P78410 334 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 ILKQ13418 452 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 LTB4RQ15722 352 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 ZNF425Q6IV72 752 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 SLC48A1Q6P1K1 146 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 TRIM73Q86UV7 250 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 MFSD9Q8NBP5 474 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 GABRG3Q99928 467 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 CHCHD6Q9BRQ6 235 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 C6orf106Q9H6K1 298 aaPredicted RBP21.38■■□□□ 1.01
SRRM1-222ENST00000596378 MAN2C1Q9NTJ4 1040 aa21.38■■□□□ 1.01
SRRM1-222ENST00000596378 ZSCAN32Q9NX65 697 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms