RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 ARHGAP11AQ6P4F7 1023 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 RPTNQ6XPR3 784 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 Q6ZPB1 254 aaPredicted RBP16.02■□□□□ 0.16
IRF3-208ENST00000594387 BANPQ8N9N5 519 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 FAM76AQ8TAV0 307 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 EXOSC8Q96B26 276 aaKnown RBP16.02■□□□□ 0.16
IRF3-208ENST00000594387 FAM111AQ96PZ2 611 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 EBPLQ9BY08 206 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 TTTY12Q9BZ98 90 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 DEFB127Q9H1M4 99 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 IL1RL2Q9HB29 575 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 MIEF1Q9NQG6 463 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 DEPPQ9NTK1 212 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 SIRT5Q9NXA8 310 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 BOKQ9UMX3 212 aaPredicted RBP16.02■□□□□ 0.16
IRF3-208ENST00000594387 ZNF835Q9Y2P0 537 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 WBP11Q9Y2W2 641 aaKnown RBP16.02■□□□□ 0.16
IRF3-208ENST00000594387 FIS1Q9Y3D6 152 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 NPFFR2Q9Y5X5 522 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 LRRK2Q5S007 2527 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 ASH1LQ9NR48 2969 aaKnown RBP16.01■□□□□ 0.15
IRF3-208ENST00000594387 A0A1B0GTH9 108 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 FAM166BA8MTA8 275 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 AZIN1O14977 448 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 SPAG7O75391 227 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 SEC22BO75396 215 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 RSL1D1O76021 490 aaKnown RBP16.01■□□□□ 0.15
IRF3-208ENST00000594387 PDE9AO76083 593 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 TPOP07202 933 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 FBXO45P0C2W1 286 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 CT62P0C5K7 136 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 RNF224P0DH78 156 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 DNASE1L1P49184 302 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 FOXA1P55317 472 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 DCAF7P61962 342 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 HSF1Q00613 529 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 PCLAFQ15004 111 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 PRICKLE4Q2TBC4 344 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 KRT71Q3SY84 523 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 TBCELQ5QJ74 424 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 GALNT18Q6P9A2 607 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 TRIM46Q7Z4K8 759 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 CCDC116Q8IYX3 515 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 C17orf47Q8NEP4 570 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 OR5M3Q8NGP4 307 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 METTL2AQ96IZ6 378 aaKnown RBP16.01■□□□□ 0.15
IRF3-208ENST00000594387 BBS4Q96RK4 519 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 GATA5Q9BWX5 397 aaPredicted RBP16.01■□□□□ 0.15
IRF3-208ENST00000594387 LDAHQ9H6V9 325 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 EXO5Q9H790 373 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 EHD3Q9NZN3 535 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 B4GALT7Q9UBV7 327 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 TINAGQ9UJW2 476 aa16.01■□□□□ 0.15
IRF3-208ENST00000594387 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.01■□□□□ 0.15
IRF3-208ENST00000594387 ZNF407Q9C0G0 2248 aa16■□□□□ 0.15
IRF3-208ENST00000594387 A0A1W2PS29 197 aa16■□□□□ 0.15
IRF3-208ENST00000594387 RGS16O15492 202 aaPredicted RBP16■□□□□ 0.15
IRF3-208ENST00000594387 ZNF354AO60765 605 aaPredicted RBP16■□□□□ 0.15
IRF3-208ENST00000594387 WISP2O76076 250 aa16■□□□□ 0.15
IRF3-208ENST00000594387 NADKO95544 446 aaPredicted RBP16■□□□□ 0.15
IRF3-208ENST00000594387 CCL3P10147 92 aa16■□□□□ 0.15
IRF3-208ENST00000594387 PTGER1P34995 402 aa16■□□□□ 0.15
IRF3-208ENST00000594387 RAE1P78406 368 aaKnown RBP16■□□□□ 0.15
IRF3-208ENST00000594387 SLC10A1Q14973 349 aa16■□□□□ 0.15
IRF3-208ENST00000594387 NTRK2Q16620 822 aa16■□□□□ 0.15
IRF3-208ENST00000594387 TMEM198Q66K66 360 aa16■□□□□ 0.15
IRF3-208ENST00000594387 XKRXQ6PP77 449 aa16■□□□□ 0.15
IRF3-208ENST00000594387 FAM111BQ6SJ93 734 aa16■□□□□ 0.15
IRF3-208ENST00000594387 MRGPRGQ86SM5 289 aa16■□□□□ 0.15
IRF3-208ENST00000594387 CROCCP2Q86T23 111 aa16■□□□□ 0.15
IRF3-208ENST00000594387 FBXW8Q8N3Y1 598 aa16■□□□□ 0.15
IRF3-208ENST00000594387 FAM109AQ8N4B1 249 aa16■□□□□ 0.15
IRF3-208ENST00000594387 ZNF808Q8N4W9 903 aaPredicted RBP16■□□□□ 0.15
IRF3-208ENST00000594387 MREGQ8N565 214 aa16■□□□□ 0.15
IRF3-208ENST00000594387 ZNF615Q8N8J6 731 aa16■□□□□ 0.15
IRF3-208ENST00000594387 ADCY4Q8NFM4 1077 aa16■□□□□ 0.15
IRF3-208ENST00000594387 OR52N2Q8NGI0 321 aa16■□□□□ 0.15
IRF3-208ENST00000594387 PPP1R14CQ8TAE6 165 aa16■□□□□ 0.15
IRF3-208ENST00000594387 TCP10LQ8TDR4 215 aa16■□□□□ 0.15
IRF3-208ENST00000594387 PAQR8Q8TEZ7 354 aa16■□□□□ 0.15
IRF3-208ENST00000594387 DIO2Q92813 273 aa16■□□□□ 0.15
IRF3-208ENST00000594387 CNRIP1Q96F85 164 aaPredicted RBP16■□□□□ 0.15
IRF3-208ENST00000594387 CCDC120Q96HB5 630 aa16■□□□□ 0.15
IRF3-208ENST00000594387 JSRP1Q96MG2 331 aaPredicted RBP16■□□□□ 0.15
IRF3-208ENST00000594387 TMEM109Q9BVC6 243 aa16■□□□□ 0.15
IRF3-208ENST00000594387 SLC35C2Q9NQQ7 365 aa16■□□□□ 0.15
IRF3-208ENST00000594387 MAT2BQ9NZL9 334 aa16■□□□□ 0.15
IRF3-208ENST00000594387 HEY2Q9UBP5 337 aa16■□□□□ 0.15
IRF3-208ENST00000594387 USP9XQ93008 2570 aaPredicted RBP15.99■□□□□ 0.15
IRF3-208ENST00000594387 NPHS1O60500 1241 aa15.99■□□□□ 0.15
IRF3-208ENST00000594387 MYZAPP0CAP1 466 aa15.99■□□□□ 0.15
IRF3-208ENST00000594387 NEFHP12036 1026 aa15.99■□□□□ 0.15
IRF3-208ENST00000594387 ALDH3A1P30838 453 aa15.99■□□□□ 0.15
IRF3-208ENST00000594387 PIGAP37287 484 aa15.99■□□□□ 0.15
IRF3-208ENST00000594387 EXOSC7Q15024 291 aaKnown RBP15.99■□□□□ 0.15
IRF3-208ENST00000594387 RPS6KA2Q15349 733 aa15.99■□□□□ 0.15
IRF3-208ENST00000594387 CMPK2Q5EBM0 449 aa15.99■□□□□ 0.15
IRF3-208ENST00000594387 PRAMEF20Q5VT98 475 aa15.99■□□□□ 0.15
IRF3-208ENST00000594387 CLEC6AQ6EIG7 209 aa15.99■□□□□ 0.15
IRF3-208ENST00000594387 TMEM211Q6ICI0 200 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms