RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 EGFL7Q9UHF1 273 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 MAGEL2Q9UJ55 1249 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 MAP4K5Q9Y4K4 846 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 TMEM184BQ9Y519 407 aaPredicted RBP12.63□□□□□ -0.39
VMP1-217ENST00000593168 SNX8Q9Y5X2 465 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 SEC16AO15027 2179 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 PLOD2O00469 737 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 ARPC2O15144 300 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 FGF17O60258 216 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 GMNNO75496 209 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 PSMG1O95456 288 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 C1QCP02747 245 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 FHP07954 510 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 HBQ1P09105 142 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 SLC35E2P0CK97 266 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 GGT1P19440 569 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 HSD17B7P56937 341 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 GABREP78334 506 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 IGLV3-21P80748 117 aaPredicted RBP12.62□□□□□ -0.39
VMP1-217ENST00000593168 BIKQ13323 160 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 C16orf72Q14CZ0 275 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 CYP51A1Q16850 503 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 SPDYE7PQ495Y7 208 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 PRAMEF17Q5VTA0 474 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 BROXQ5VW32 411 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 BHLHB9Q6PI77 547 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 RBM44Q6ZP01 1051 aaKnown RBP12.62□□□□□ -0.39
VMP1-217ENST00000593168 C6orf120Q7Z4R8 191 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 B3GNT8Q7Z7M8 397 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 PPP1R3BQ86XI6 285 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 OR4N5Q8IXE1 308 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 ZZZ3Q8IYH5 903 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 SHISA5Q8N114 240 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 METTL27Q8N6F8 245 aaPredicted RBP12.62□□□□□ -0.39
VMP1-217ENST00000593168 BMPERQ8N8U9 685 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 C7orf57Q8NEG2 295 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 OR52E4Q8NGH9 312 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 SLC26A7Q8TE54 656 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 TTC9Q92623 222 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 ELP4Q96EB1 424 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 DUS3LQ96G46 650 aaKnown RBP12.62□□□□□ -0.39
VMP1-217ENST00000593168 OR1F2PQ96R84 312 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 GORASP2Q9H8Y8 452 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 C3orf14Q9HBI5 128 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 ZNF304Q9HCX3 659 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 PRTFDC1Q9NRG1 225 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 OCIAD1Q9NX40 245 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 NTMQ9P121 344 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 DHCR7Q9UBM7 475 aaKnown RBP12.62□□□□□ -0.39
VMP1-217ENST00000593168 ACSL6Q9UKU0 697 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 USP22Q9UPT9 525 aa12.62□□□□□ -0.39
VMP1-217ENST00000593168 A0A1W2PS29 197 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 TCRBV3S1A0A5B6 114 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 EFCAB7A8K855 629 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 GSTA4O15217 222 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 EMC8O43402 210 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 B4GALT2O60909 372 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 LDB3O75112 727 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 TNFRSF21O75509 655 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 DXOO77932 396 aaKnown RBP12.61□□□□□ -0.39
VMP1-217ENST00000593168 ONECUT2O95948 504 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 ATP1B1P05026 303 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 C8BP07358 591 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 ATP6V1B2P21281 511 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 XCR1P46094 333 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 OR1D4P47884 311 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 PDX1P52945 283 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 UCNP55089 124 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 TXNL4AP83876 142 aaKnown RBP12.61□□□□□ -0.39
VMP1-217ENST00000593168 PRR5P85299 388 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 MC2RQ01718 297 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 RBBP4Q09028 425 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 VEZF1Q14119 521 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 ADRM1Q16186 407 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 SYT16Q17RD7 645 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 VMACQ2NL98 169 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 MTX3Q5HYI7 312 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.61□□□□□ -0.39
VMP1-217ENST00000593168 ZFP1Q6P2D0 407 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 ANGPTL8Q6UXH0 198 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 SPATA24Q86W54 205 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 RNF130Q86XS8 419 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 ENDOVQ8N8Q3 282 aaKnown RBP12.61□□□□□ -0.39
VMP1-217ENST00000593168 HIPK4Q8NE63 616 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 OR56A1Q8NGH5 318 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 OR9A2Q8NGT5 310 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 OR5AK3PQ8NH89 298 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 PNPT1Q8TCS8 783 aaKnown RBP12.61□□□□□ -0.39
VMP1-217ENST00000593168 KCNE4Q8WWG9 221 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 POP5Q969H6 163 aaKnown RBP12.61□□□□□ -0.39
VMP1-217ENST00000593168 SLC7A5P2Q9GIP4 190 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 TMEM38AQ9H6F2 299 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 RNPEPL1Q9HAU8 725 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 S100A14Q9HCY8 104 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 FBXO8Q9NRD0 319 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 ZCCHC3Q9NUD5 404 aaKnown RBP12.61□□□□□ -0.39
VMP1-217ENST00000593168 AKAP7Q9P0M2 348 aaPredicted RBP12.61□□□□□ -0.39
VMP1-217ENST00000593168 MMACHCQ9Y4U1 282 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 MAU2Q9Y6X3 613 aa12.61□□□□□ -0.39
VMP1-217ENST00000593168 A0A087WV62 115 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms