RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 ZDHHC2Q9UIJ5 367 aa16.82■□□□□ 0.28
DDX39A-212ENST00000590260 ERVK-11Q9UQG0 969 aa16.82■□□□□ 0.28
DDX39A-212ENST00000590260 KLF13Q9Y2Y9 288 aaPredicted RBP16.82■□□□□ 0.28
DDX39A-212ENST00000590260 TRAF6Q9Y4K3 522 aa16.82■□□□□ 0.28
DDX39A-212ENST00000590260 ZGRF1Q86YA3 2104 aa16.82■□□□□ 0.28
DDX39A-212ENST00000590260 POLEQ07864 2286 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 NPIPA5E9PKD4 350 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 LSM1O15116 133 aaKnown RBP16.81■□□□□ 0.28
DDX39A-212ENST00000590260 ITM2AO43736 263 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 DYRK3O43781 588 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 CRCPO75575 148 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 LINC00032P0C843 101 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 PCSK2P16519 638 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 GPX3P22352 226 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 SERPINB4P48594 390 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 MRPS35P82673 323 aaKnown RBP16.81■□□□□ 0.28
DDX39A-212ENST00000590260 ZNF763Q0D2J5 394 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 ELOAQ14241 798 aaKnown RBP16.81■□□□□ 0.28
DDX39A-212ENST00000590260 IMPG1Q17R60 797 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 ZNF628Q5EBL2 1059 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 OPN5Q6U736 354 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 LRIG3Q6UXM1 1119 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 RTL4Q6ZR62 310 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 SLC29A4Q7RTT9 530 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 CCDC116Q8IYX3 515 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 LRRC25Q8N386 305 aaPredicted RBP16.81■□□□□ 0.28
DDX39A-212ENST00000590260 VWA5B2Q8N398 1253 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 OR2M7Q8NG81 312 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 TWIST2Q8WVJ9 160 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 PGM2Q96G03 612 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 C3orf30Q96M34 536 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 BRINP2Q9C0B6 783 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 C20orf27Q9GZN8 174 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 MYNNQ9NPC7 610 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 TIMMDC1Q9NPL8 285 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 RRAGDQ9NQL2 400 aaPredicted RBP16.81■□□□□ 0.28
DDX39A-212ENST00000590260 NPIPA1Q9UND3 350 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 ZNF835Q9Y2P0 537 aa16.81■□□□□ 0.28
DDX39A-212ENST00000590260 LRRK2Q5S007 2527 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 DOPEY2Q9Y3R5 2298 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 C2orf92A0A1B0GVN3 265 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 GOLGA6L10A6NI86 522 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 PIP5K1BO14986 540 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 LRRTM2O43300 516 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 CTIFO43310 598 aaKnown RBP16.8■□□□□ 0.28
DDX39A-212ENST00000590260 LYPLA1O75608 230 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-212ENST00000590260 FBXO45P0C2W1 286 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 ZNF24P17028 368 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 DDCP20711 480 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 DEKP35659 375 aaKnown RBP16.8■□□□□ 0.28
DDX39A-212ENST00000590260 EMDP50402 254 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 C2orf80Q0P641 193 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 FOXO1Q12778 655 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 RFTN2Q52LD8 501 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-212ENST00000590260 C4orf17Q53FE4 359 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 CMPK2Q5EBM0 449 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 XKR7Q5GH72 579 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 C1QL3Q5VWW1 255 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 DESI1Q6ICB0 168 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 SLC15A4Q8N697 577 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 GOLM1Q8NBJ4 401 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 OR9A2Q8NGT5 310 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 FAM76AQ8TAV0 307 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 AGR3Q8TD06 166 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 ZNF675Q8TD23 568 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 SSC4DQ8WTU2 575 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 SPACA9Q96E40 222 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-212ENST00000590260 NXF5Q9H1B4 397 aaKnown RBP16.8■□□□□ 0.28
DDX39A-212ENST00000590260 LRTM1Q9HBL6 345 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 SLC35C2Q9NQQ7 365 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.8■□□□□ 0.28
DDX39A-212ENST00000590260 C1orf109Q9NX04 203 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 EHD3Q9NZN3 535 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 SLC5A6Q9Y289 635 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 CHCHD2Q9Y6H1 151 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-212ENST00000590260 NCKAP5O14513 1909 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 HECTD1Q9ULT8 2610 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 SVILO95425 2214 aa16.8■□□□□ 0.28
DDX39A-212ENST00000590260 MYO1GB0I1T2 1018 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 SLC28A1O00337 649 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 ASNA1O43681 348 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 HS6ST1O60243 411 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 SEC22BO75396 215 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 GLSO94925 669 aaPredicted RBP16.79■□□□□ 0.28
DDX39A-212ENST00000590260 JUNP05412 331 aaKnown RBP16.79■□□□□ 0.28
DDX39A-212ENST00000590260 SDC1P18827 310 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 PIGAP37287 484 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 GSTM5P46439 218 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 DNASE1L1P49184 302 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 HEPACAMQ14CZ8 416 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 SH2D4BQ5SQS7 431 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 TICAM1Q8IUC6 712 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 CLYBLQ8N0X4 340 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 FAM98AQ8NCA5 519 aaKnown RBP16.79■□□□□ 0.28
DDX39A-212ENST00000590260 OR7G1Q8NGA0 311 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 OR10G3Q8NGC4 313 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 OR52N2Q8NGI0 321 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 CDC26Q8NHZ8 85 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 SLC22A8Q8TCC7 542 aa16.79■□□□□ 0.28
DDX39A-212ENST00000590260 PAQR8Q8TEZ7 354 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms