RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 HDAC3O15379 428 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 PRAMEF2O60811 474 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 CBX7O95931 251 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 KITP10721 976 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 PRPS2P11908 318 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 HLCSP50747 726 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 TLE1Q04724 770 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 PTGR1Q14914 329 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 OR1C1Q15619 314 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 TRMT12Q53H54 448 aaKnown RBP18.72■□□□□ 0.59
DDX39A-207ENST00000588542 PRR30Q53SZ7 412 aaPredicted RBP18.72■□□□□ 0.59
DDX39A-207ENST00000588542 C6orf163Q5TEZ5 329 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 SPINK14Q6IE38 97 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 LARP4Q71RC2 724 aaKnown RBP eCLIP18.72■□□□□ 0.59
DDX39A-207ENST00000588542 WDR75Q8IWA0 830 aaKnown RBP18.72■□□□□ 0.59
DDX39A-207ENST00000588542 OR7G1Q8NGA0 311 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 OR9A2Q8NGT5 310 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 BBS4Q96RK4 519 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 RASL10BQ96S79 203 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 WWTR1Q9GZV5 400 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 ASIC5Q9NY37 505 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 TTLL8A6PVC2 850 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 PCSK2P16519 638 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 MPIP34949 423 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 SSR4P51571 173 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 MRPS35P82673 323 aaKnown RBP18.71■□□□□ 0.59
DDX39A-207ENST00000588542 OC90Q02509 493 aaPredicted RBP18.71■□□□□ 0.59
DDX39A-207ENST00000588542 MAD2L1Q13257 205 aaPredicted RBP18.71■□□□□ 0.59
DDX39A-207ENST00000588542 EXOSC7Q15024 291 aaKnown RBP18.71■□□□□ 0.59
DDX39A-207ENST00000588542 PIGGQ5H8A4 983 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 RPUSD3Q6P087 351 aaKnown RBP18.71■□□□□ 0.59
DDX39A-207ENST00000588542 SLC29A4Q7RTT9 530 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 MAVSQ7Z434 540 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 ZNF441Q8N8Z8 693 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 LRRC8CQ8TDW0 803 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 KAT2AQ92830 837 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 HES7Q9BYE0 225 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 GLIPR2Q9H4G4 154 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 SLCO1B3Q9NPD5 702 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 LRFN1Q9P244 771 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 NTNG1Q9Y2I2 539 aa18.71■□□□□ 0.59
DDX39A-207ENST00000588542 NBASA2RRP1 2371 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 SLCO1B7G3V0H7 640 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 ZNF195O14628 629 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 NADKO95544 446 aaPredicted RBP18.7■□□□□ 0.58
DDX39A-207ENST00000588542 G6PDP11413 515 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 PLA2G2AP14555 144 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 SOX3P41225 446 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 CYB561P49447 251 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 INPP5JQ15735 1006 aaPredicted RBP18.7■□□□□ 0.58
DDX39A-207ENST00000588542 ZNF766Q5HY98 468 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 FHL5Q5TD97 284 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 RIMKLAQ8IXN7 391 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 LRRC34Q8IZ02 419 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 FAM9CQ8IZT9 166 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 C16orf52Q8NHV5 167 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 PIWIL2Q8TC59 973 aaKnown RBP18.7■□□□□ 0.58
DDX39A-207ENST00000588542 NUDT8Q8WV74 236 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 DYDC1Q8WWB3 177 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 CKAP2Q8WWK9 683 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 ADIPOR1Q96A54 375 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 CIDECQ96AQ7 238 aaPredicted RBP18.7■□□□□ 0.58
DDX39A-207ENST00000588542 SNRNP40Q96DI7 357 aaKnown RBP18.7■□□□□ 0.58
DDX39A-207ENST00000588542 MTERF3Q96E29 417 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 SCMH1Q96GD3 660 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 C7orf26Q96N11 449 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 AMDHD1Q96NU7 426 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 ANKRA2Q9H9E1 313 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 NOP53Q9NZM5 478 aaKnown RBP18.7■□□□□ 0.58
DDX39A-207ENST00000588542 ATP6V1HQ9UI12 483 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 EIF3LQ9Y262 564 aaKnown RBP18.7■□□□□ 0.58
DDX39A-207ENST00000588542 DTX4Q9Y2E6 619 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 PCDHGB6Q9Y5F9 930 aa18.7■□□□□ 0.58
DDX39A-207ENST00000588542 NUP214P35658 2090 aaPredicted RBP18.7■□□□□ 0.58
DDX39A-207ENST00000588542 SCAMP2O15127 329 aaKnown RBP18.69■□□□□ 0.58
DDX39A-207ENST00000588542 VPS4BO75351 444 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 OR6B1O95007 311 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 NTSP30990 170 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 FRKP42685 505 aaPredicted RBP18.69■□□□□ 0.58
DDX39A-207ENST00000588542 NCBP2P52298 156 aaKnown RBP eCLIP18.69■□□□□ 0.58
DDX39A-207ENST00000588542 DIO3P55073 304 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 CISD2Q8N5K1 135 aaKnown RBP18.69■□□□□ 0.58
DDX39A-207ENST00000588542 TMEM156Q8N614 296 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 KRTCAP2Q8N6L1 136 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 OR7A2PQ8NGA2 310 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 OR52R1Q8NGF1 315 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 CPT1CQ8TCG5 803 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 PPCDCQ96CD2 204 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 GAL3ST4Q96RP7 486 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 TRIM4Q9C037 500 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 WDR55Q9H6Y2 383 aaPredicted RBP18.69■□□□□ 0.58
DDX39A-207ENST00000588542 SH3BP4Q9P0V3 963 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 BCAP29Q9UHQ4 241 aa18.69■□□□□ 0.58
DDX39A-207ENST00000588542 GCN1Q92616 2671 aaKnown RBP18.68■□□□□ 0.58
DDX39A-207ENST00000588542 C2orf92A0A1B0GVN3 265 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 TRPC5OSA6NMA1 111 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 PDPK1O15530 556 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 PLOD3O60568 738 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 SP1P08047 785 aa18.68■□□□□ 0.58
DDX39A-207ENST00000588542 LBPP18428 481 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms