RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 ATP1B1P05026 303 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 IL3P08700 152 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 KRT4P19013 534 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 MAGEA5P43359 124 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 NAGLUP54802 743 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 NAA20P61599 178 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 KCNJ2P63252 427 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 FOXO1Q12778 655 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 PRICKLE4Q2TBC4 344 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 FAM180BQ6P0A1 224 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 FAM111BQ6SJ93 734 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 C4orf33Q8N1A6 199 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 VWA5B2Q8N398 1253 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 FBXW8Q8N3Y1 598 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 OR10G3Q8NGC4 313 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 OR5M3Q8NGP4 307 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 PHF10Q8WUB8 498 aaKnown RBP16.3■□□□□ 0.2
TPM4-206ENST00000587201 C12orf65Q9H3J6 166 aaKnown RBP16.3■□□□□ 0.2
TPM4-206ENST00000587201 PFDN4Q9NQP4 134 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 CNIH4Q9P003 139 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 HEY2Q9UBP5 337 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 BCAP29Q9UHQ4 241 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 UTS2RQ9UKP6 389 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 DLGAP4Q9Y2H0 992 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 CHCHD2Q9Y6H1 151 aaPredicted RBP16.3■□□□□ 0.2
TPM4-206ENST00000587201 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.3■□□□□ 0.2
TPM4-206ENST00000587201 GTF3C1Q12789 2109 aa16.3■□□□□ 0.2
TPM4-206ENST00000587201 ATP6AP2A0A1C7CYW4 349 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 NPIPA2E9PIF3 369 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 NPIPA3F8WFD2 350 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 TP53I11O14683 189 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 ATP6AP2O75787 350 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 CPA3P15088 417 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 AGAP20933 346 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 S1PR1P21453 382 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 HTR1EP28566 365 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 GRNP28799 593 aaKnown RBP16.29■□□□□ 0.2
TPM4-206ENST00000587201 FOXA1P55317 472 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 NRG3P56975 720 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 DNAJB13P59910 316 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 VSNL1P62760 191 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 RAE1P78406 368 aaKnown RBP16.29■□□□□ 0.2
TPM4-206ENST00000587201 MAP4K2Q12851 820 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 NTRK2Q16620 822 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 HYAL4Q2M3T9 481 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 SPDYAQ5MJ70 313 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 TMEM64Q6YI46 380 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 FRMD7Q6ZUT3 714 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 LRRC25Q8N386 305 aaPredicted RBP16.29■□□□□ 0.2
TPM4-206ENST00000587201 ADCY4Q8NFM4 1077 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 OR2W6PQ8NHA6 318 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 RDH11Q8TC12 318 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 ADIPOR1Q96A54 375 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 DMRTA2Q96SC8 542 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 LDAHQ9H6V9 325 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 MAT2BQ9NZL9 334 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 BOKQ9UMX3 212 aaPredicted RBP16.29■□□□□ 0.2
TPM4-206ENST00000587201 CFL2Q9Y281 166 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 NPFFR2Q9Y5X5 522 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 LIPGQ9Y5X9 500 aa16.29■□□□□ 0.2
TPM4-206ENST00000587201 EML6Q6ZMW3 1958 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 SERTM1A2A2V5 107 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 H3BQF6 201 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 ADAM10O14672 748 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 HNRNPRO43390 633 aaKnown RBP16.28■□□□□ 0.2
TPM4-206ENST00000587201 LRATO95237 230 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 DRD2P14416 443 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 TIA1P31483 386 aaKnown RBP eCLIP16.28■□□□□ 0.21e-15■■□□□ 12.5
TPM4-206ENST00000587201 TMED10P49755 219 aaKnown RBP16.28■□□□□ 0.2
TPM4-206ENST00000587201 DUSP2Q05923 314 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 SLC18A2Q05940 514 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 MGAT2Q10469 447 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 SLC10A1Q14973 349 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 HEPACAMQ14CZ8 416 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 EXOSC7Q15024 291 aaKnown RBP16.28■□□□□ 0.2
TPM4-206ENST00000587201 RPS6KA2Q15349 733 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 IMPG1Q17R60 797 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 ZNF630Q2M218 657 aaPredicted RBP16.28■□□□□ 0.2
TPM4-206ENST00000587201 PRR22Q8IZ63 422 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 C16orf78Q8WTQ4 265 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 DIO2Q92813 273 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 MARVELD3Q96A59 401 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 CNRIP1Q96F85 164 aaPredicted RBP16.28■□□□□ 0.2
TPM4-206ENST00000587201 JSRP1Q96MG2 331 aaPredicted RBP16.28■□□□□ 0.2
TPM4-206ENST00000587201 ZNF681Q96N22 645 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 SMC6Q96SB8 1091 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 EBPLQ9BY08 206 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 IQCGQ9H095 443 aaKnown RBP16.28■□□□□ 0.2
TPM4-206ENST00000587201 TP63Q9H3D4 680 aaPredicted RBP16.28■□□□□ 0.2
TPM4-206ENST00000587201 ZFP64Q9NPA5 681 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 CHST11Q9NPF2 352 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 OXSMQ9NWU1 459 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 MID2Q9UJV3 735 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 CNOT11Q9UKZ1 510 aaKnown RBP16.28■□□□□ 0.2
TPM4-206ENST00000587201 HRH3Q9Y5N1 445 aa16.28■□□□□ 0.2
TPM4-206ENST00000587201 CLDN14O95500 239 aa16.27■□□□□ 0.2
TPM4-206ENST00000587201 IGHG3P01860 377 aa16.27■□□□□ 0.2
TPM4-206ENST00000587201 CELA3AP09093 270 aa16.27■□□□□ 0.2
TPM4-206ENST00000587201 ANXA4P09525 319 aaPredicted RBP16.27■□□□□ 0.2
TPM4-206ENST00000587201 GPX3P22352 226 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms