RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ZDHHC2Q9UIJ5 367 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 MID2Q9UJV3 735 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 CNOT11Q9UKZ1 510 aaKnown RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 ZNF835Q9Y2P0 537 aa8.01□□□□□ -1.13
SMG6-216ENST00000575176 YARS2Q9Y2Z4 477 aaKnown RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 POLR3HQ9Y535 204 aaPredicted RBP8.01□□□□□ -1.13
SMG6-216ENST00000575176 MYO7BQ6PIF6 2116 aa8□□□□□ -1.13
SMG6-216ENST00000575176 HCFC1P51610 2035 aa8□□□□□ -1.13
SMG6-216ENST00000575176 ANKUB1A6NFN9 424 aa8□□□□□ -1.13
SMG6-216ENST00000575176 OR6C76A6NM76 312 aa8□□□□□ -1.13
SMG6-216ENST00000575176 MYO1GB0I1T2 1018 aa8□□□□□ -1.13
SMG6-216ENST00000575176 TBX19O60806 448 aa8□□□□□ -1.13
SMG6-216ENST00000575176 RASAL1O95294 804 aa8□□□□□ -1.13
SMG6-216ENST00000575176 H2AFXP16104 143 aaPredicted RBP8□□□□□ -1.13
SMG6-216ENST00000575176 PORP16435 677 aaPredicted RBP8□□□□□ -1.13
SMG6-216ENST00000575176 PCSK2P16519 638 aa8□□□□□ -1.13
SMG6-216ENST00000575176 DDCP20711 480 aa8□□□□□ -1.13
SMG6-216ENST00000575176 TLX1P31314 330 aaPredicted RBP8□□□□□ -1.13
SMG6-216ENST00000575176 FEN1P39748 380 aaKnown RBP8□□□□□ -1.13
SMG6-216ENST00000575176 RFC3P40938 356 aa8□□□□□ -1.13
SMG6-216ENST00000575176 PTGDSP41222 190 aa8□□□□□ -1.13
SMG6-216ENST00000575176 MAP3K8P41279 467 aa8□□□□□ -1.13
SMG6-216ENST00000575176 MEOX1P50221 254 aa8□□□□□ -1.13
SMG6-216ENST00000575176 SSR4P51571 173 aa8□□□□□ -1.13
SMG6-216ENST00000575176 XKP51811 444 aa8□□□□□ -1.13
SMG6-216ENST00000575176 GPR85P60893 370 aa8□□□□□ -1.13
SMG6-216ENST00000575176 HSF1Q00613 529 aa8□□□□□ -1.13
SMG6-216ENST00000575176 ACSM2AQ08AH3 577 aa8□□□□□ -1.13
SMG6-216ENST00000575176 ASPHQ12797 758 aa8□□□□□ -1.13
SMG6-216ENST00000575176 BIKQ13323 160 aa8□□□□□ -1.13
SMG6-216ENST00000575176 UBAP2LQ14157 1087 aaKnown RBP8□□□□□ -1.13
SMG6-216ENST00000575176 ZNF267Q14586 743 aaPredicted RBP8□□□□□ -1.13
SMG6-216ENST00000575176 EXOSC7Q15024 291 aaKnown RBP8□□□□□ -1.13
SMG6-216ENST00000575176 NTRK2Q16620 822 aa8□□□□□ -1.13
SMG6-216ENST00000575176 TRMT12Q53H54 448 aaKnown RBP8□□□□□ -1.13
SMG6-216ENST00000575176 CEP85LQ5SZL2 805 aa8□□□□□ -1.13
SMG6-216ENST00000575176 ACSM2BQ68CK6 577 aa8□□□□□ -1.13
SMG6-216ENST00000575176 DESI1Q6ICB0 168 aa8□□□□□ -1.13
SMG6-216ENST00000575176 NOXRED1Q6NXP6 359 aa8□□□□□ -1.13
SMG6-216ENST00000575176 FAM180AQ6UWF9 173 aa8□□□□□ -1.13
SMG6-216ENST00000575176 Q6ZPB1 254 aaPredicted RBP8□□□□□ -1.13
SMG6-216ENST00000575176 PNPLA5Q7Z6Z6 429 aaPredicted RBP8□□□□□ -1.13
SMG6-216ENST00000575176 ATCAYQ86WG3 371 aa8□□□□□ -1.13
SMG6-216ENST00000575176 SULF2Q8IWU5 870 aa8□□□□□ -1.13
SMG6-216ENST00000575176 GPALPP1Q8IXQ4 340 aa8□□□□□ -1.13
SMG6-216ENST00000575176 VWA5B2Q8N398 1253 aa8□□□□□ -1.13
SMG6-216ENST00000575176 FAM26EQ8N5C1 309 aa8□□□□□ -1.13
SMG6-216ENST00000575176 GOLM1Q8NBJ4 401 aa8□□□□□ -1.13
SMG6-216ENST00000575176 C17orf47Q8NEP4 570 aa8□□□□□ -1.13
SMG6-216ENST00000575176 ADCY4Q8NFM4 1077 aa8□□□□□ -1.13
SMG6-216ENST00000575176 OR7G2Q8NG99 324 aa8□□□□□ -1.13
SMG6-216ENST00000575176 OR4K14Q8NGD5 310 aa8□□□□□ -1.13
SMG6-216ENST00000575176 OR9A2Q8NGT5 310 aa8□□□□□ -1.13
SMG6-216ENST00000575176 FAM76AQ8TAV0 307 aa8□□□□□ -1.13
SMG6-216ENST00000575176 PAQR8Q8TEZ7 354 aa8□□□□□ -1.13
SMG6-216ENST00000575176 NUDT8Q8WV74 236 aa8□□□□□ -1.13
SMG6-216ENST00000575176 RIT1Q92963 219 aa8□□□□□ -1.13
SMG6-216ENST00000575176 SPACA9Q96E40 222 aaPredicted RBP8□□□□□ -1.13
SMG6-216ENST00000575176 METTL2AQ96IZ6 378 aaKnown RBP8□□□□□ -1.13
SMG6-216ENST00000575176 VSTM2LQ96N03 204 aa8□□□□□ -1.13
SMG6-216ENST00000575176 GPR137Q96N19 417 aa8□□□□□ -1.13
SMG6-216ENST00000575176 BTBD9Q96Q07 612 aa8□□□□□ -1.13
SMG6-216ENST00000575176 SMC6Q96SB8 1091 aa8□□□□□ -1.13
SMG6-216ENST00000575176 CCT7Q99832 543 aa8□□□□□ -1.13
SMG6-216ENST00000575176 CNPPD1Q9BV87 410 aa8□□□□□ -1.13
SMG6-216ENST00000575176 ITPAQ9BY32 194 aa8□□□□□ -1.13
SMG6-216ENST00000575176 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8□□□□□ -1.13
SMG6-216ENST00000575176 NXF5Q9H1B4 397 aaKnown RBP8□□□□□ -1.13
SMG6-216ENST00000575176 TSPAN10Q9H1Z9 355 aaPredicted RBP8□□□□□ -1.13
SMG6-216ENST00000575176 ZDHHC11Q9H8X9 412 aa8□□□□□ -1.13
SMG6-216ENST00000575176 AHSPQ9NZD4 102 aa8□□□□□ -1.13
SMG6-216ENST00000575176 LIPGQ9Y5X9 500 aa8□□□□□ -1.13
SMG6-216ENST00000575176 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 FCHO1O14526 889 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 TM9SF1O15321 606 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 RGS16O15492 202 aaPredicted RBP7.99□□□□□ -1.13
SMG6-216ENST00000575176 SNNO75324 88 aaPredicted RBP7.99□□□□□ -1.13
SMG6-216ENST00000575176 VPS4BO75351 444 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 TUBBP07437 444 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 ANXA4P09525 319 aaPredicted RBP7.99□□□□□ -1.13
SMG6-216ENST00000575176 CT45A8P0DMV1 189 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 CT45A9P0DMV2 189 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 COX7A2P14406 83 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 DRD2P14416 443 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 ENDOUP21128 410 aaKnown RBP7.99□□□□□ -1.13
SMG6-216ENST00000575176 PIK3R1P27986 724 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 SERPINB5P36952 375 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 GSTM5P46439 218 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 RPL38P63173 70 aaKnown RBP7.99□□□□□ -1.13
SMG6-216ENST00000575176 HYAL4Q2M3T9 481 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 CT45A2Q5DJT8 189 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 SH2D4BQ5SQS7 431 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 BICRALQ6AI39 1079 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 TMEM64Q6YI46 380 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 RNF111Q6ZNA4 994 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 IKBIPQ70UQ0 350 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 RIMKLAQ8IXN7 391 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 LRRC25Q8N386 305 aaPredicted RBP7.99□□□□□ -1.13
SMG6-216ENST00000575176 FBXW8Q8N3Y1 598 aa7.99□□□□□ -1.13
SMG6-216ENST00000575176 ZNF781Q8N8C0 355 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms