RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 SZRD1Q7Z422 152 aa11.88□□□□□ -0.51
CDT1-203ENST00000569140 OR52R1Q8NGF1 315 aa11.88□□□□□ -0.51
CDT1-203ENST00000569140 OR8K3Q8NH51 312 aa11.88□□□□□ -0.51
CDT1-203ENST00000569140 SLC22A8Q8TCC7 542 aa11.88□□□□□ -0.51
CDT1-203ENST00000569140 ZNF75CPQ92670 426 aaPredicted RBP11.88□□□□□ -0.51
CDT1-203ENST00000569140 MAGED4Q96JG8 741 aa11.88□□□□□ -0.51
CDT1-203ENST00000569140 RASL10BQ96S79 203 aa11.88□□□□□ -0.51
CDT1-203ENST00000569140 WWTR1Q9GZV5 400 aa11.88□□□□□ -0.51
CDT1-203ENST00000569140 REEP4Q9H6H4 257 aa11.88□□□□□ -0.51
CDT1-203ENST00000569140 AKTIPQ9H8T0 292 aa11.88□□□□□ -0.51
CDT1-203ENST00000569140 ZNF446Q9NWS9 450 aa11.88□□□□□ -0.51
CDT1-203ENST00000569140 NOP53Q9NZM5 478 aaKnown RBP11.88□□□□□ -0.51
CDT1-203ENST00000569140 BOD1L1Q8NFC6 3051 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 GOLGA8QA0A0J9YX86 632 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 GOLGA8OA6NCC3 632 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 TRPC5OSA6NMA1 111 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 GOLGA8NF8WBI6 632 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 J3QKU1 62 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 SNNO75324 88 aaPredicted RBP11.87□□□□□ -0.51
CDT1-203ENST00000569140 VPS4BO75351 444 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 OR6B1O95007 311 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 RASAL1O95294 804 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 CLPSP04118 112 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 PRPS2P11908 318 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 DDX5P17844 614 aaKnown RBP11.87□□□□□ -0.51
CDT1-203ENST00000569140 NR0B1P51843 470 aaKnown RBP11.87□□□□□ -0.51
CDT1-203ENST00000569140 PMP22Q01453 160 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 PTGR1Q14914 329 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 EBPQ15125 230 aaKnown RBP11.87□□□□□ -0.51
CDT1-203ENST00000569140 PRSS53Q2L4Q9 553 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 TRMT12Q53H54 448 aaKnown RBP11.87□□□□□ -0.51
CDT1-203ENST00000569140 NXNQ6DKJ4 435 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 OPN5Q6U736 354 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 TMEM107Q6UX40 140 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 R3HCC1LQ7Z5L2 792 aaKnown RBP11.87□□□□□ -0.51
CDT1-203ENST00000569140 ATCAYQ86WG3 371 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 TMEM178AQ8NBL3 297 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 FAM98AQ8NCA5 519 aaKnown RBP11.87□□□□□ -0.51
CDT1-203ENST00000569140 MDS2Q8NDY4 140 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 OR7G1Q8NGA0 311 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 ZFP28Q8NHY6 868 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 NUBPLQ8TB37 319 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 CIDECQ96AQ7 238 aaPredicted RBP11.87□□□□□ -0.51
CDT1-203ENST00000569140 SNRNP40Q96DI7 357 aaKnown RBP11.87□□□□□ -0.51
CDT1-203ENST00000569140 FCRL1Q96LA6 429 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 ZNF681Q96N22 645 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 ITPAQ9BY32 194 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 ANKRA2Q9H9E1 313 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 ASF1BQ9NVP2 202 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 VPS4AQ9UN37 437 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 ATRXP46100 2492 aa11.87□□□□□ -0.51
CDT1-203ENST00000569140 TMEM200CA6NKL6 621 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 SCAMP2O15127 329 aaKnown RBP11.86□□□□□ -0.51
CDT1-203ENST00000569140 HDAC3O15379 428 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 NEURL1O76050 574 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 SP1P08047 785 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 G6PDP11413 515 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 LBPP18428 481 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 EFNA1P20827 205 aaPredicted RBP11.86□□□□□ -0.51
CDT1-203ENST00000569140 TRHRP34981 398 aaPredicted RBP11.86□□□□□ -0.51
CDT1-203ENST00000569140 RPL3P39023 403 aaKnown RBP11.86□□□□□ -0.51
CDT1-203ENST00000569140 MC3RP41968 323 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 NRG3P56975 720 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 OCRLQ01968 901 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 SRSF11Q05519 484 aaKnown RBP11.86□□□□□ -0.51
CDT1-203ENST00000569140 FUT7Q11130 342 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 MAP4K2Q12851 820 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 ZNF155Q12901 538 aaPredicted RBP11.86□□□□□ -0.51
CDT1-203ENST00000569140 ZNF385BQ569K4 471 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 ZNF628Q5EBL2 1059 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 SLC25A25Q6KCM7 469 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 GALNTL5Q7Z4T8 443 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 PRR22Q8IZ63 422 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 TAGAPQ8N103 731 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 FAM13CQ8NE31 585 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 OR7A2PQ8NGA2 310 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 OR5M3Q8NGP4 307 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 C16orf52Q8NHV5 167 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDT1-203ENST00000569140 GRHL3Q8TE85 626 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 GLIPR2Q9H4G4 154 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 MEAF6Q9HAF1 191 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 TIMMDC1Q9NPL8 285 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 AGPAT4Q9NRZ5 378 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 DDX18Q9NVP1 670 aaKnown RBP11.86□□□□□ -0.51
CDT1-203ENST00000569140 PRODH2Q9UF12 536 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 HAO1Q9UJM8 370 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 EXO1Q9UQ84 846 aaKnown RBP11.86□□□□□ -0.51
CDT1-203ENST00000569140 CFL2Q9Y281 166 aa11.86□□□□□ -0.51
CDT1-203ENST00000569140 BSNQ9UPA5 3926 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 MYO1GB0I1T2 1018 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 SLCO1B7G3V0H7 640 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 G3V3Y1 287 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 KLF11O14901 512 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 DIAPH2O60879 1101 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 BCAS2O75934 225 aaPredicted RBP11.85□□□□□ -0.51
CDT1-203ENST00000569140 CBX7O95931 251 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 GPX3P22352 226 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 EPHA3P29320 983 aa11.85□□□□□ -0.51
CDT1-203ENST00000569140 MANFP55145 182 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms