RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 TO15178 435 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 PCDH7O60245 1069 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 OR10H2O60403 315 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 PLOD3O60568 738 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 BCAS2O75934 225 aaPredicted RBP7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 AGFG2O95081 481 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 UNC5CO95185 931 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 CBX7O95931 251 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 IGHG3P01860 377 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 BPGMP07738 259 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 IL3P08700 152 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 GP1BBP13224 206 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 DDCP20711 480 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 SERPINB3P29508 390 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 SSTR4P31391 388 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 CA7P43166 264 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 MEOX1P50221 254 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 EMDP50402 254 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 KCNK10P57789 538 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 IFFO1Q0D2I5 559 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 ZNF763Q0D2J5 394 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 DUSP8Q13202 625 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 PRSS53Q2L4Q9 553 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 ZNF750Q32MQ0 723 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 ZNF628Q5EBL2 1059 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 CMPK2Q5EBM0 449 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 ARL13AQ5H913 290 aaPredicted RBP7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 SLC22A10Q63ZE4 541 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 KANK2Q63ZY3 851 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 NOXRED1Q6NXP6 359 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 LRIG3Q6UXM1 1119 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 GFRALQ6UXV0 394 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 IKBIPQ70UQ0 350 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 SLC29A4Q7RTT9 530 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 FGD2Q7Z6J4 655 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 CROCCP2Q86T23 111 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 EXOC3L1Q86VI1 746 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 SPPL2CQ8IUH8 684 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 SRRM1Q8IYB3 904 aaKnown RBP7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 CLYBLQ8N0X4 340 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 LRRC25Q8N386 305 aaPredicted RBP7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 VWA5B2Q8N398 1253 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 OR2M7Q8NG81 312 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 SLC22A8Q8TCC7 542 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 HOXB13Q92826 284 aaPredicted RBP7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 SPACA9Q96E40 222 aaPredicted RBP7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 PGM2Q96G03 612 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 FAM111AQ96PZ2 611 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 SMC6Q96SB8 1091 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 FAM173AQ9BQD7 235 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 MYNNQ9NPC7 610 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 RRAGDQ9NQL2 400 aaPredicted RBP7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 SLC35C2Q9NQQ7 365 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 CNIH4Q9P003 139 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 HAO1Q9UJM8 370 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 UTS2RQ9UKP6 389 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 CNOT11Q9UKZ1 510 aaKnown RBP7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 OSGIN2Q9Y236 505 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 CFL2Q9Y281 166 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 V9GYY5 206 aaPredicted RBP7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 HECTD1Q9ULT8 2610 aa7.55□□□□□ -1.2
HDGFL3-205ENST00000568129 UTP20O75691 2785 aaKnown RBP7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 A0A087WV62 115 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 C2orf92A0A1B0GVN3 265 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 PLOD2O00469 737 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 LSM1O15116 133 aaKnown RBP7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 TM9SF1O15321 606 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 BIRC5O15392 142 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 LRRTM2O43300 516 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 SPAG7O75391 227 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 SLITRK5O94991 958 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 SNUPNO95149 360 aaKnown RBP7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 PSMG1O95456 288 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 CHRNGP07510 517 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 ANXA4P09525 319 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 CCL3P10147 92 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 NEFHP12036 1026 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 ZNF24P17028 368 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 AGAP20933 346 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 DRD5P21918 477 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 GPX3P22352 226 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 DEKP35659 375 aaKnown RBP7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 FEN1P39748 380 aaKnown RBP7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 FRKP42685 505 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 PPICP45877 212 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 SLC18A1P54219 525 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 DCAF7P61962 342 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 RBPJQ06330 500 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 PDE7AQ13946 482 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 TRMT12Q53H54 448 aaKnown RBP7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 XKR7Q5GH72 579 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 BEND6Q5SZJ8 279 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 CES4AQ5XG92 561 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 CLEC6AQ6EIG7 209 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 FAM111BQ6SJ93 734 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 SCIMPQ6UWF3 145 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 TAGAPQ8N103 731 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 GHDCQ8N2G8 530 aa7.54□□□□□ -1.2
HDGFL3-205ENST00000568129 FBXW8Q8N3Y1 598 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms