RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 RPUSD3Q6P087 351 aaKnown RBP11.5□□□□□ -0.57
RNF40-211ENST00000567365 CCDC116Q8IYX3 515 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 VWA5B2Q8N398 1253 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 GOLGA6L1Q8N7Z2 621 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 OR7G1Q8NGA0 311 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 OR9A2Q8NGT5 310 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 CLHC1Q8NHS4 586 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 PIWIL2Q8TC59 973 aaKnown RBP11.5□□□□□ -0.57
RNF40-211ENST00000567365 THAP3Q8WTV1 239 aaPredicted RBP11.5□□□□□ -0.57
RNF40-211ENST00000567365 CKAP2Q8WWK9 683 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 ADIPOR1Q96A54 375 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 ERP27Q96DN0 273 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 MTERF3Q96E29 417 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 SCMH1Q96GD3 660 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 RASL10BQ96S79 203 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 C1orf50Q9BV19 199 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 CNPPD1Q9BV87 410 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 GLIPR2Q9H4G4 154 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 LIN28AQ9H9Z2 209 aaKnown RBP11.5□□□□□ -0.57
RNF40-211ENST00000567365 SLCO1B3Q9NPD5 702 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 RYDENQ9NUL5 291 aaKnown RBP11.5□□□□□ -0.57
RNF40-211ENST00000567365 INTS9Q9NV88 658 aaKnown RBP11.5□□□□□ -0.57
RNF40-211ENST00000567365 COPS7AQ9UBW8 275 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 NTNG1Q9Y2I2 539 aa11.5□□□□□ -0.57
RNF40-211ENST00000567365 YARS2Q9Y2Z4 477 aaKnown RBP11.5□□□□□ -0.57
RNF40-211ENST00000567365 EXPH5Q8NEV8 1989 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 TRAV17A0A0B4J275 112 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 SLCO1B7G3V0H7 640 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 PLOD2O00469 737 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 SCAMP2O15127 329 aaKnown RBP11.49□□□□□ -0.57
RNF40-211ENST00000567365 DYRK3O43781 588 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 SLC28A2O43868 658 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 PLOD3O60568 738 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 OR2J2O76002 312 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 PSMG1O95456 288 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 ALDOCP09972 364 aaKnown RBP11.49□□□□□ -0.57
RNF40-211ENST00000567365 MAPK1P28482 360 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 EMDP50402 254 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 ST13P50502 369 aaKnown RBP11.49□□□□□ -0.57
RNF40-211ENST00000567365 DIO3P55073 304 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 MRPS35P82673 323 aaKnown RBP11.49□□□□□ -0.57
RNF40-211ENST00000567365 KCNC4Q03721 635 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 TRMT12Q53H54 448 aaKnown RBP11.49□□□□□ -0.57
RNF40-211ENST00000567365 PIGGQ5H8A4 983 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 RNF111Q6ZNA4 994 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 CAMKMTQ7Z624 323 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 LIX1Q8N485 282 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 FNDC5Q8NAU1 212 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 C17orf47Q8NEP4 570 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 ADCY4Q8NFM4 1077 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 OR5L2Q8NGL0 311 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 CDC26Q8NHZ8 85 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 GFM2Q969S9 779 aaKnown RBP11.49□□□□□ -0.57
RNF40-211ENST00000567365 COQ8BQ96D53 544 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 AMDHD1Q96NU7 426 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 WWTR1Q9GZV5 400 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 OR10A5Q9H207 317 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 ACBD3Q9H3P7 528 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 MIEF1Q9NQG6 463 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.49□□□□□ -0.57
RNF40-211ENST00000567365 LUZP4Q9P127 313 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 MAP10Q9P2G4 905 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 MARCOQ9UEW3 520 aaPredicted RBP11.49□□□□□ -0.57
RNF40-211ENST00000567365 DTX4Q9Y2E6 619 aa11.49□□□□□ -0.57
RNF40-211ENST00000567365 POLEQ07864 2286 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 A0A087WV62 115 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 WWP2O00308 870 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 AKAP10O43572 662 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 PRAMEF2O60811 474 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 VPS4BO75351 444 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 SLITRK5O94991 958 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 LRATO95237 230 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 WISP1O95388 367 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 G6PDP11413 515 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 PCSK2P16519 638 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 GPX3P22352 226 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 MPIP34949 423 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 MLLT10P55197 1068 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 CLDN8P56748 225 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 MAD2L1Q13257 205 aaPredicted RBP11.48□□□□□ -0.57
RNF40-211ENST00000567365 EXOSC7Q15024 291 aaKnown RBP11.48□□□□□ -0.57
RNF40-211ENST00000567365 OR1C1Q15619 314 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 PRR30Q53SZ7 412 aaPredicted RBP11.48□□□□□ -0.57
RNF40-211ENST00000567365 SPINK14Q6IE38 97 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 ANKRD26P1Q6NSI1 321 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 KRTCAP2Q8N6L1 136 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 OR7G2Q8NG99 324 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 C16orf52Q8NHV5 167 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 LRRC8CQ8TDW0 803 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 NUDT8Q8WV74 236 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 TP53INP1Q96A56 240 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 PPP1R36Q96LQ0 422 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 MAGEB18Q96M61 343 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 TAAR6Q96RI8 345 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 BBS4Q96RK4 519 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 UTP23Q9BRU9 249 aaKnown RBP11.48□□□□□ -0.57
RNF40-211ENST00000567365 HES7Q9BYE0 225 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 TRIM4Q9C037 500 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 BRINP2Q9C0B6 783 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 WDR55Q9H6Y2 383 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms