RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 PRAMEF2O60811 474 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 COQ9O75208 318 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 C6orf47O95873 294 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 IGKV3-11P04433 115 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 IFI6P09912 130 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 ITGAMP11215 1152 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 SSTR4P31391 388 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 MC3RP41968 323 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 SOX8P57073 446 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 MRPS35P82673 323 aaKnown RBP17.51■□□□□ 0.39
RAB40C-207ENST00000563109 FUT7Q11130 342 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 RCAN2Q14206 197 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 COL28A1Q2UY09 1125 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 SLC29A4Q7RTT9 530 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 SZRD1Q7Z422 152 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 PIGWQ7Z7B1 504 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 ANKRD46Q86W74 232 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 KIF2BQ8N4N8 673 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 SLC5A8Q8N695 610 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 OR4A15Q8NGL6 344 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 CRELD1Q96HD1 420 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 OR10A5Q9H207 317 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 C3orf14Q9HBI5 128 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 SAR1AQ9NR31 198 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 GPR83Q9NYM4 423 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 PTGFRNQ9P2B2 879 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 TEKT2Q9UIF3 430 aa17.51■□□□□ 0.39
RAB40C-207ENST00000563109 ACACBO00763 2458 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 A0A087WV62 115 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 DYTNA2CJ06 578 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 PLOD2O00469 737 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 PLOD3O60568 738 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 DNAJB5O75953 348 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 ZFAND5O76080 213 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 ABCB1P08183 1280 aaPredicted RBP17.5■□□□□ 0.39
RAB40C-207ENST00000563109 SOAT1P35610 550 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 CDK9P50750 372 aaKnown RBP17.5■□□□□ 0.39
RAB40C-207ENST00000563109 GPR143P51810 404 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 WNT3P56703 355 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 PRR5P85299 388 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 MGAT2Q10469 447 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 UBAP2LQ14157 1087 aaKnown RBP17.5■□□□□ 0.39
RAB40C-207ENST00000563109 EXOSC7Q15024 291 aaKnown RBP17.5■□□□□ 0.39
RAB40C-207ENST00000563109 MAPRE2Q15555 327 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 SPDYE7PQ495Y7 208 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 BLOC1S3Q6QNY0 202 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 ZNF321PQ8N8H1 164 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 OR7G2Q8NG99 324 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 OR52R1Q8NGF1 315 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 OR5L2Q8NGL0 311 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 OR8K3Q8NH51 312 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 BRIX1Q8TDN6 353 aaKnown RBP17.5■□□□□ 0.39
RAB40C-207ENST00000563109 EXTL1Q92935 676 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 CTHRC1Q96CG8 243 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 SPDL1Q96EA4 605 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 ELP4Q96EB1 424 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 MAGED4Q96JG8 741 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 ARHGAP9Q9BRR9 750 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 NMUR2Q9GZQ4 415 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 TAS2R9Q9NYW1 312 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 PRODH2Q9UF12 536 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 ZNF639Q9UID6 485 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 BTNL2Q9UIR0 455 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 SNX8Q9Y5X2 465 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 CAPN7Q9Y6W3 813 aa17.5■□□□□ 0.39
RAB40C-207ENST00000563109 A8MUI8 341 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 FCHO1O14526 889 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 SLC22A2O15244 555 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 CPSF4O95639 269 aaKnown RBP17.49■□□□□ 0.39
RAB40C-207ENST00000563109 CBX7O95931 251 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 ALPPP05187 535 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 ADSLP30566 484 aaPredicted RBP17.49■□□□□ 0.39
RAB40C-207ENST00000563109 ZFP36L2P47974 494 aaKnown RBP17.49■□□□□ 0.39
RAB40C-207ENST00000563109 POLE2P56282 527 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 SLC37A1P57057 533 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 RHDQ02161 417 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 MYBPC3Q14896 1274 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 TRMT12Q53H54 448 aaKnown RBP17.49■□□□□ 0.39
RAB40C-207ENST00000563109 HLA-DQA1Q5Y7H0 255 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 GK5Q6ZS86 529 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 CLECL1Q8IZS7 167 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 ITCHQ96J02 903 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 CCDC115Q96NT0 180 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 GAL3ST4Q96RP7 486 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 ABI3Q9P2A4 366 aa17.49■□□□□ 0.39
RAB40C-207ENST00000563109 ZNF223Q9UK11 482 aaPredicted RBP17.49■□□□□ 0.39
RAB40C-207ENST00000563109 PTPRQQ9UMZ3 2332 aa17.48■□□□□ 0.39
RAB40C-207ENST00000563109 MKRN2OSH3BPM6 223 aa17.48■□□□□ 0.39
RAB40C-207ENST00000563109 NDUFAB1O14561 156 aa17.48■□□□□ 0.39
RAB40C-207ENST00000563109 EMC8O43402 210 aa17.48■□□□□ 0.39
RAB40C-207ENST00000563109 DCTN3O75935 186 aa17.48■□□□□ 0.39
RAB40C-207ENST00000563109 S1PR1P21453 382 aa17.48■□□□□ 0.39
RAB40C-207ENST00000563109 HBA1P69905 142 aa17.48■□□□□ 0.39
RAB40C-207ENST00000563109 RNF4P78317 190 aa17.48■□□□□ 0.39
RAB40C-207ENST00000563109 PHC1P78364 1004 aa17.48■□□□□ 0.39
RAB40C-207ENST00000563109 ZNF155Q12901 538 aaPredicted RBP17.48■□□□□ 0.39
RAB40C-207ENST00000563109 KLF10Q13118 480 aa17.48■□□□□ 0.39
RAB40C-207ENST00000563109 RAPSNQ13702 412 aa17.48■□□□□ 0.39
RAB40C-207ENST00000563109 MAPKAPK3Q16644 382 aa17.48■□□□□ 0.39
RAB40C-207ENST00000563109 CRB2Q5IJ48 1285 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms