RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 PPIDQ08752 370 aaKnown RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 GALNT2Q10471 571 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 AP1B1Q10567 949 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 ASPHQ12797 758 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 NME3Q13232 169 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 NFATC2Q13469 925 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 DPYSQ14117 519 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 TMED2Q15363 201 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 PDK4Q16654 411 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 UGP2Q16851 508 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 WSCD2Q2TBF2 565 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 ANXA2RQ3ZCQ2 193 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 FAM133BQ5BKY9 247 aaKnown RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 MS4A13Q5J8X5 152 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 LRRC73Q5JTD7 316 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 FNBP1LQ5T0N5 605 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 GRTP1Q5TC63 336 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 DGAT2L7PQ6IED9 249 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 WDR74Q6RFH5 385 aaPredicted RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 LINC00696Q6ZRV3 163 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 CYP4V2Q6ZWL3 525 aaPredicted RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 NLRP9Q7RTR0 991 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 TRPM8Q7Z2W7 1104 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 PID1Q7Z2X4 250 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 SPATA21Q7Z572 469 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 NRROSQ86YC3 692 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 CTAGE3PQ8IX95 158 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 C10orf67Q8IYJ2 551 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 LRRC34Q8IZ02 419 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 KIRREL3Q8IZU9 778 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 LGI2Q8N0V4 545 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 CLYBLQ8N0X4 340 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 BANPQ8N9N5 519 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 MAPK1IP1LQ8NDC0 245 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 FBXO36Q8NEA4 188 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 OR56A4Q8NGH8 313 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 SGMS2Q8NHU3 365 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 OSR1Q8TAX0 266 aaPredicted RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 DENND1AQ8TEH3 1009 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 PPP4R1Q8TF05 950 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 NSMCE1Q8WV22 266 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 KCNJ9Q92806 393 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 FER1L6-AS2Q96M78 137 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 COG8Q96MW5 612 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 TSNARE1Q96NA8 513 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 SERPINB11Q96P15 392 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 RAB3IPQ96QF0 476 aaPredicted RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 PEBP4Q96S96 227 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 PAFAH2Q99487 392 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 ABHD14AQ9BUJ0 271 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 WRAP53Q9BUR4 548 aaKnown RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 MLPHQ9BV36 600 aaPredicted RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 C1QTNF7Q9BXJ2 289 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 IL22Q9GZX6 179 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 FGF22Q9HCT0 170 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.02□□□□□ -1.93
SPG11-225ENST00000561391 TXLNGQ9NUQ3 528 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 EURLQ9NYK6 297 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 KLHL8Q9P2G9 620 aaPredicted RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 OR12D3Q9UGF7 316 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 TBK1Q9UHD2 729 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 RPL26L1Q9UNX3 145 aaKnown RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 MAD1L1Q9Y6D9 718 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 USH1CQ9Y6N9 552 aa3.02□□□□□ -1.93
SPG11-225ENST00000561391 NYNRINQ9P2P1 1898 aaKnown RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 INTS1Q8N201 2190 aaKnown RBP3.02□□□□□ -1.93
SPG11-225ENST00000561391 CHD5Q8TDI0 1954 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SEC16AO15027 2179 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 CCDC189A1A4V9 331 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 FAM170AA1A519 330 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 ARHGAP42A6NI28 874 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 MBD3L5A6NJ08 208 aaPredicted RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 FAM159BA6NKW6 160 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 LINC01548A6NM66 108 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 KCNU1A8MYU2 1149 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 STX16-NPEPL1H3BU86 382 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 PEX12O00623 359 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 STX16O14662 325 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 RRHO14718 337 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 PFDN6O15212 129 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 KIF1CO43896 1103 aaKnown RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 CCDC22O60826 627 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SMPD2O60906 423 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 DNAJB6O75190 326 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 GLRA3O75311 464 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 METTL18O95568 372 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 AP2A1O95782 977 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 LATS1O95835 1130 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 MOCS2O96007 188 aaPredicted RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 F10P00742 488 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 EPOP01588 193 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 PCCBP05166 539 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 ENO1P06733 434 aaKnown RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 PYGLP06737 847 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 KLK3P07288 261 aaPredicted RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 ALDOCP09972 364 aaKnown RBP3.01□□□□□ -1.93
SPG11-225ENST00000561391 FAM157CP0CG43 387 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 SRCP12931 536 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 HSD3B1P14060 373 aa3.01□□□□□ -1.93
SPG11-225ENST00000561391 ST6GAL1P15907 406 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms