RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 SDC1P18827 310 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 DDCP20711 480 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 MST1P26927 711 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 RFC3P40938 356 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 FUT7Q11130 342 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 EIF2S3LQ2VIR3 472 aaKnown RBP12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 XKR7Q5GH72 579 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 PIGGQ5H8A4 983 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 AGBL2Q5U5Z8 902 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 RNF165Q6ZSG1 346 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 HDXQ7Z353 690 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 LRRC25Q8N386 305 aaPredicted RBP12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 C7orf57Q8NEG2 295 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 OR9A2Q8NGT5 310 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 OR8K3Q8NH51 312 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 FAM76AQ8TAV0 307 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 FAR1Q8WVX9 515 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 ASB15Q8WXK1 588 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 ART5Q96L15 291 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 FCRL1Q96LA6 429 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 C5orf34Q96MH7 638 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 BARD1Q99728 777 aaKnown RBP12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 WWTR1Q9GZV5 400 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 TRIM45Q9H8W5 580 aaPredicted RBP12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 MYNNQ9NPC7 610 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 BCAP29Q9UHQ4 241 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 VPS4AQ9UN37 437 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 ERVK-11Q9UQG0 969 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 DOPEY2Q9Y3R5 2298 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 PRRC2CQ9Y520 2896 aaKnown RBP12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 A8MVJ9 347 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 G3V3Y1 287 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 ZNHIT1O43257 154 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 CBX6O95503 412 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 CBX7O95931 251 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 ATP1B1P05026 303 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 BCKDHAP12694 445 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 NR0B1P51843 470 aaKnown RBP12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 GPR85P60893 370 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 MAP4K2Q12851 820 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 EBPQ15125 230 aaKnown RBP12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 ZNF385BQ569K4 471 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 C6orf136Q5SQH8 315 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 LYPD8Q6UX82 237 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 SLC29A4Q7RTT9 530 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 SULF2Q8IWU5 870 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 PRR22Q8IZ63 422 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 CYP4Z2PQ8N1L4 340 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 CPSF7Q8N684 471 aaKnown RBP12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 OR52R1Q8NGF1 315 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 NUBPLQ8TB37 319 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 ATP6V1G3Q96LB4 118 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 TSPAN10Q9H1Z9 355 aaPredicted RBP12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 ARGLU1Q9NWB6 273 aaPredicted RBP12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 HPF1Q9NWY4 346 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 NKIRAS1Q9NYS0 192 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 ZNF639Q9UID6 485 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 RAP2CQ9Y3L5 183 aa12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 UBR5O95071 2799 aaPredicted RBP12.79□□□□□ -0.36
TSPAN3-205ENST00000558745 SPTAN1Q13813 2472 aaKnown RBP12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 TEP1Q99973 2627 aaKnown RBP12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 A0A0G2JMM0 328 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 C2orf92A0A1B0GVN3 265 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 A0A1W2PPB8 328 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 A0A1W2PRS3 328 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 PINLYPA6NC86 204 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 KIR3DP1A8MWS1 328 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 MYO1GB0I1T2 1018 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 NME2P1O60361 137 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 EFNA1P20827 205 aaPredicted RBP12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 NME2P22392 152 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 GRK2P25098 689 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 RPL14P50914 215 aaKnown RBP12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 NNATQ16517 81 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 MPEG1Q2M385 716 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 ZNF628Q5EBL2 1059 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 RNFT1Q5M7Z0 435 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 IL23RQ5VWK5 629 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 ZNF324BQ6AW86 544 aaPredicted RBP12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 FAM180AQ6UWF9 173 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 ATCAYQ86WG3 371 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 VWA5B2Q8N398 1253 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 LIX1Q8N485 282 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 ZNF441Q8N8Z8 693 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 GALNT11Q8NCW6 608 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 C16orf52Q8NHV5 167 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 ADIPOR1Q96A54 375 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 CIDECQ96AQ7 238 aaPredicted RBP12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 CTHRC1Q96CG8 243 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 TUBGCP3Q96CW5 907 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 BBS4Q96RK4 519 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 MIEF1Q9NQG6 463 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 AGPAT4Q9NRZ5 378 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 DEPPQ9NTK1 212 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 OLAHQ9NV23 265 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 ENTPD4Q9Y227 616 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 EML6Q6ZMW3 1958 aa12.78□□□□□ -0.36
TSPAN3-205ENST00000558745 PEX1O43933 1283 aa12.77□□□□□ -0.37
TSPAN3-205ENST00000558745 KITP10721 976 aa12.77□□□□□ -0.37
TSPAN3-205ENST00000558745 GP1BBP13224 206 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms