RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 ETV1P50549 477 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 MANFP55145 182 aaKnown RBP15.42■□□□□ 0.06
SHMT2-232ENST00000557487 TAP2Q03519 686 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 GINS1Q14691 196 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 MLC1Q15049 377 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 RPS26P11Q5JNZ5 115 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-232ENST00000557487 C1orf94Q6P1W5 598 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 MZT2AQ6P582 158 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 LCTLQ6UWM7 567 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 TMIGD1Q6UXZ0 262 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 MRGPREQ86SM8 312 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 UBASH3BQ8TF42 649 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 LRR1Q96L50 414 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 FYTTD1Q96QD9 318 aaKnown RBP15.42■□□□□ 0.06
SHMT2-232ENST00000557487 FNDC11Q9BVV2 318 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 GTPBP2Q9BX10 602 aaKnown RBP15.42■□□□□ 0.06
SHMT2-232ENST00000557487 P2RX2Q9UBL9 471 aa15.42■□□□□ 0.06
SHMT2-232ENST00000557487 COLQQ9Y215 455 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-232ENST00000557487 LINC00854A0A1B0GVQ3 168 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 LEFTY2O00292 366 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 SEMA7AO75326 666 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 SLC43A1O75387 559 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 TNNI3P19429 210 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 GALP22466 123 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 PDHA2P29803 388 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 IFNGR2P38484 337 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 CYP4F8P98187 520 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.41■□□□□ 0.06
SHMT2-232ENST00000557487 MINDY4Q4G0A6 757 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 SNAP47Q5SQN1 464 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 TNFAIP8L2Q6P589 184 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-232ENST00000557487 C6orf120Q7Z4R8 191 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 CAMKK1Q8N5S9 505 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 TBC1D19Q8N5T2 526 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 SMPDL3AQ92484 453 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 FOXJ1Q92949 421 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 C1GALT1C1Q96EU7 318 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 ZBED6CLQ96FA7 236 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-232ENST00000557487 MED30Q96HR3 178 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 TMEM121BQ9BXQ6 578 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-232ENST00000557487 RHBGQ9H310 441 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 PPP1R3EQ9H7J1 279 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 PLSCR3Q9NRY6 295 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 ACSS1Q9NUB1 689 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-232ENST00000557487 A4GNTQ9UNA3 340 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 OR6C70A6NIJ9 312 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 SGK494L7N484 410 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 ORC5O43913 435 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 IGFBP1P08833 259 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-232ENST00000557487 PPP2R1BP30154 601 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 ANXA11P50995 505 aaKnown RBP15.41■□□□□ 0.06
SHMT2-232ENST00000557487 MAPK12P53778 367 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 GAS1P54826 345 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 CLDN20P56880 219 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 CD83Q01151 205 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 SF3A2Q15428 464 aaKnown RBP15.41■□□□□ 0.06
SHMT2-232ENST00000557487 TATDN3Q17R31 274 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 SPDYE7PQ495Y7 208 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 CRTC2Q53ET0 693 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-232ENST00000557487 PODNL1Q6PEZ8 512 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 PAQR6Q6TCH4 344 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 CREB3L2Q70SY1 520 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 GAREM2Q75VX8 874 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 GJD3Q8N144 294 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 LILRA3Q8N6C8 439 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-232ENST00000557487 AP2M1Q96CW1 435 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 TAS2R7Q9NYW3 318 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 BOLA1Q9Y3E2 137 aa15.41■□□□□ 0.06
SHMT2-232ENST00000557487 A0A0B4J293 547 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 C17orf113A0A1B0GUU1 675 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-232ENST00000557487 ANHXE9PGG2 379 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 HMGN4O00479 90 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 CHST10O43529 356 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 ZNF780AO75290 641 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-232ENST00000557487 CLEC2LP0C7M8 214 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 TGM4P49221 684 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 PCBP4P57723 403 aaKnown RBP15.4■□□□□ 0.06
SHMT2-232ENST00000557487 ACSM1Q08AH1 577 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 RIPPLY1Q0D2K3 151 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 EFR3AQ14156 821 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 GNA13Q14344 377 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 FAM83HQ6ZRV2 1179 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-232ENST00000557487 PRICKLE2Q7Z3G6 844 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 Q8N402 240 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 YIPF7Q8N8F6 280 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 ATP6V1C2Q8NEY4 427 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 OR4K5Q8NGD3 323 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 BBS10Q8TAM1 723 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 RNF31Q96EP0 1072 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 ZNF514Q96K75 400 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-232ENST00000557487 SLC38A2Q96QD8 506 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 ARHGAP9Q9BRR9 750 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 MARVELD1Q9BSK0 173 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 PITHD1Q9GZP4 211 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-232ENST00000557487 DPEP2Q9H4A9 486 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 GIMAP4Q9NUV9 329 aa15.4■□□□□ 0.06
SHMT2-232ENST00000557487 MRPL39Q9NYK5 338 aaKnown RBP15.4■□□□□ 0.06
SHMT2-232ENST00000557487 NDRG2Q9UN36 371 aaKnown RBP15.4■□□□□ 0.06
SHMT2-232ENST00000557487 SH2B3Q9UQQ2 575 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms