RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 GGTLC2Q14390 218 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 EBPQ15125 230 aaKnown RBP11.22□□□□□ -0.61
PSEN1-220ENST00000557037 CTU2Q2VPK5 515 aaKnown RBP11.22□□□□□ -0.61
PSEN1-220ENST00000557037 NCMAPQ5T1S8 102 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 DESI1Q6ICB0 168 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 ZNF619Q8N2I2 560 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 EEF1AKMT1Q8WVE0 214 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 RHBDF1Q96CC6 855 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 MAPKAP1Q9BPZ7 522 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 CCDC68Q9H2F9 335 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 ZNF696Q9H7X3 374 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 COPS7BQ9H9Q2 264 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-220ENST00000557037 GALNT9Q9HCQ5 603 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 FBXO6Q9NRD1 293 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-220ENST00000557037 ARL15Q9NXU5 204 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 ARMCX1Q9P291 453 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 CMYA5Q8N3K9 4069 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 UQCRHLA0A096LP55 91 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 CTAGE9A4FU28 777 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 PTMAP06454 111 aaKnown RBP11.21□□□□□ -0.61
PSEN1-220ENST00000557037 APRTP07741 180 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 HIST1H2AGP0C0S8 130 aaPredicted RBP11.21□□□□□ -0.61
PSEN1-220ENST00000557037 HIST1H2ADP20671 130 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 FDFT1P37268 417 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 RPP38P78345 283 aaKnown RBP11.21□□□□□ -0.61
PSEN1-220ENST00000557037 DOC2AQ14183 400 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 NEPROQ6NW34 567 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 TRIM40Q6P9F5 258 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 AAGABQ6PD74 315 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 DTX2Q86UW9 622 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 SEMA6DQ8NFY4 1073 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 OR2L5Q8NG80 312 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 FNDC9Q8TBE3 224 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 ZFAND2BQ8WV99 257 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 PROX1Q92786 737 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 KCNJ9Q92806 393 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 RBM18Q96H35 190 aaKnown RBP11.21□□□□□ -0.61
PSEN1-220ENST00000557037 HIST1H2AHQ96KK5 128 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 CHP1Q99653 195 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 HIST1H2AJQ99878 128 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 H2AFJQ9BTM1 129 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 PRR14Q9BWN1 585 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 ACTR8Q9H981 624 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 RAB6BQ9NRW1 208 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 DNAJC11Q9NVH1 559 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 SYBUQ9NX95 663 aa11.21□□□□□ -0.61
PSEN1-220ENST00000557037 CISD1Q9NZ45 108 aaKnown RBP11.21□□□□□ -0.61
PSEN1-220ENST00000557037 PTBP2Q9UKA9 531 aaKnown RBP11.21□□□□□ -0.61
PSEN1-220ENST00000557037 EXPH5Q8NEV8 1989 aa11.21□□□□□ -0.62
PSEN1-220ENST00000557037 RYR3Q15413 4870 aa11.21□□□□□ -0.62
PSEN1-220ENST00000557037 C2orf92A0A1B0GVN3 265 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 SYCE3A1L190 88 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 SMTNL1A8MU46 457 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 FAM157AC9JC47 383 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 H0YC42 278 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 GUCA1CO95843 209 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 IFNB1P01574 187 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 CLPSP04118 112 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 FESP07332 822 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 ETS1P14921 441 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 MGAT1P26572 445 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 CTNNA1P35221 906 aaKnown RBP11.2□□□□□ -0.62
PSEN1-220ENST00000557037 TPD52P55327 224 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-220ENST00000557037 SLC37A1P57057 533 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 C21orf58P58505 322 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 IGLV3-21P80748 117 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-220ENST00000557037 FGFBP1Q14512 234 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 ZNF470Q6ECI4 717 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 TREML4Q6UXN2 200 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 WDSUB1Q8N9V3 476 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 S100PBPQ96BU1 408 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 PINK1Q9BXM7 581 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 TRIM2Q9C040 744 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 REXO4Q9GZR2 422 aaKnown RBP11.2□□□□□ -0.62
PSEN1-220ENST00000557037 RNF122Q9H9V4 155 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 SNX15Q9NRS6 342 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 INTS10Q9NVR2 710 aaKnown RBP11.2□□□□□ -0.62
PSEN1-220ENST00000557037 CLEC4AQ9UMR7 237 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 TFR2Q9UP52 801 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 PCDHGB1Q9Y5G3 927 aa11.2□□□□□ -0.62
PSEN1-220ENST00000557037 PABPN1LA6NDY0 278 aaKnown RBP11.19□□□□□ -0.62
PSEN1-220ENST00000557037 RAMP1O60894 148 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 ICOSLGO75144 302 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 CBR3O75828 277 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 LY6HO94772 140 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 TBX6O95947 436 aaPredicted RBP11.19□□□□□ -0.62
PSEN1-220ENST00000557037 APEHP13798 732 aaKnown RBP11.19□□□□□ -0.62
PSEN1-220ENST00000557037 CNTFP26441 200 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 PTGDSP41222 190 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 PLIN5Q00G26 463 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 BSPH1Q075Z2 132 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 SP140Q13342 867 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 RAB35Q15286 201 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 TSC22D1Q15714 1073 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 HLA-DQA1Q5Y7H0 255 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 ADNP2Q6IQ32 1131 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 CASC4Q6P4E1 433 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 DNAJC14Q6Y2X3 702 aaPredicted RBP11.19□□□□□ -0.62
PSEN1-220ENST00000557037 FAM214BQ7L5A3 538 aa11.19□□□□□ -0.62
PSEN1-220ENST00000557037 THOC6Q86W42 341 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms