RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 GALK2Q01415 458 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 ABHD17BQ5VST6 288 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 RANBP10Q6VN20 620 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 IL17RCQ8NAC3 791 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 SLC37A3Q8NCC5 494 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 PEBP4Q96S96 227 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 FN3KQ9H479 309 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 AJAP1Q9UKB5 411 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-216ENST00000556083 OR1A2Q9Y585 309 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 PCDHGA3Q9Y5H0 932 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 GFRA2O00451 464 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 RGS9O75916 674 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-216ENST00000556083 NDUFB2O95178 105 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 PROS1P07225 676 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF865P0CJ78 1059 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-216ENST00000556083 HTR2AP28223 471 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 GGT2P36268 569 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 YPEL5P62699 121 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 ARSJQ5FYB0 599 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-216ENST00000556083 TXNRD3NBQ6F5E7 133 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 ANKRD26P1Q6NSI1 321 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 TMEM205Q6UW68 189 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF587Q96SQ5 575 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-216ENST00000556083 TBX5Q99593 518 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 IL37Q9NZH6 218 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-216ENST00000556083 RNASET2O00584 256 aaKnown RBP10.23□□□□□ -0.77
ACTN1-216ENST00000556083 PRAF2O60831 178 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 RP2O75695 350 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 OR7A10O76100 309 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 S100PP25815 95 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 ETV3P41162 512 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 MTNR1AP48039 350 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 CSNK2A1P68400 391 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-216ENST00000556083 RAB31Q13636 194 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 SPHARQ15513 63 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 SLC6A19Q695T7 634 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 ENPP6Q6UWR7 440 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 ARSKQ6UWY0 536 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 HTR3DQ70Z44 454 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 PARP8Q8N3A8 854 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 DNAJC22Q8N4W6 341 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 HHIPL1Q96JK4 782 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 PBDC1Q9BVG4 233 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 CCDC106Q9BWC9 280 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 PINK1Q9BXM7 581 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 C2orf42Q9NWW7 574 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 WDR37Q9Y2I8 494 aa10.23□□□□□ -0.77
ACTN1-216ENST00000556083 A0A1W2PP55 124 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 GNB5O14775 395 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 SLC35E2BP0CK96 405 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 DDCP20711 480 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 RPP30P78346 268 aaKnown RBP10.22□□□□□ -0.77
ACTN1-216ENST00000556083 SLC7A9P82251 487 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 NPRL3Q12980 569 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 C17orf99Q6UX52 265 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ISLR2Q6UXK2 745 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 LAS2Q8IYD9 372 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 AUTS2Q8WXX7 1259 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ECHDC3Q96DC8 303 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ITPKCQ96DU7 683 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 PDLIM5Q96HC4 596 aaKnown RBP10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF578Q96N58 590 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-216ENST00000556083 TMED9Q9BVK6 235 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF696Q9H7X3 374 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ARNT2Q9HBZ2 717 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 CTPS2Q9NRF8 586 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 LOC102725191A0A1B0GVB3 256 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 A0A1W2PPL8 197 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 DRGXA6NNA5 263 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 BPNT1O95861 308 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 PRKCGP05129 697 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 SPARCP09486 303 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ADORA3P0DMS8 318 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 EFNA1P20827 205 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-216ENST00000556083 GDF5P43026 501 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 MAGEA12P43365 314 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 SLC9A3P48764 834 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 LRRC73Q5JTD7 316 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 CCDC116Q8IYX3 515 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 GDPD1Q8N9F7 314 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF431Q8TF32 576 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-216ENST00000556083 TMEM68Q96MH6 324 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 CD207Q9UJ71 328 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 PRELID1Q9Y255 219 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 A0A0J9YY10 115 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 C17orf113A0A1B0GUU1 675 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 DENRO43583 198 aaKnown RBP10.22□□□□□ -0.77
ACTN1-216ENST00000556083 PCBD1P61457 104 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 HHEXQ03014 270 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 RBPJQ06330 500 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 KCNAB2Q13303 367 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 UAP1L1Q3KQV9 507 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 TMEM69Q5SWH9 247 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 GPR139Q6DWJ6 353 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 TLDC1Q6P9B6 456 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 KDELC1Q6UW63 502 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 SSX6Q7RTT6 188 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 PRSS48Q7RTY5 328 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 MISPQ8IVT2 679 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms