RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 FAM180BQ6P0A1 224 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 TMEM64Q6YI46 380 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 SH2D5Q6ZV89 423 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 C4orf33Q8N1A6 199 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 FBXW8Q8N3Y1 598 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 ZNF615Q8N8J6 731 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 ZNF441Q8N8Z8 693 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 OR7G1Q8NGA0 311 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 PHF10Q8WUB8 498 aaKnown RBP16.96■□□□□ 0.31
NEDD1-208ENST00000555806 APIPQ96GX9 242 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 VKORC1Q9BQB6 163 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 SH2D2AQ9NP31 389 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 RYDENQ9NUL5 291 aaKnown RBP16.96■□□□□ 0.31
NEDD1-208ENST00000555806 CNIH4Q9P003 139 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 BCAP29Q9UHQ4 241 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 UTS2RQ9UKP6 389 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 BOKQ9UMX3 212 aaPredicted RBP16.96■□□□□ 0.31
NEDD1-208ENST00000555806 DLGAP4Q9Y2H0 992 aa16.96■□□□□ 0.31
NEDD1-208ENST00000555806 ATP6AP2A0A1C7CYW4 349 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 TLDC2A0PJX2 215 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 NPIPA2E9PIF3 369 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 NPIPA3F8WFD2 350 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 HNRNPRO43390 633 aaKnown RBP16.95■□□□□ 0.3
NEDD1-208ENST00000555806 ATP6AP2O75787 350 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 ATP1B1P05026 303 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 IL3P08700 152 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 KRT4P19013 534 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 GRNP28799 593 aaKnown RBP16.95■□□□□ 0.3
NEDD1-208ENST00000555806 TIA1P31483 386 aaKnown RBP eCLIP16.95■□□□□ 0.3
NEDD1-208ENST00000555806 NAGLUP54802 743 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 FOXA1P55317 472 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 NRG3P56975 720 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 NAA20P61599 178 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 FOXO1Q12778 655 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 NTRK2Q16620 822 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 IMPG1Q17R60 797 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 SPDYAQ5MJ70 313 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 FAM111BQ6SJ93 734 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 LRRC25Q8N386 305 aaPredicted RBP16.95■□□□□ 0.3
NEDD1-208ENST00000555806 ADCY4Q8NFM4 1077 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 RDH11Q8TC12 318 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 DIO2Q92813 273 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 TP53INP1Q96A56 240 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 MARVELD3Q96A59 401 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 JSRP1Q96MG2 331 aaPredicted RBP16.95■□□□□ 0.3
NEDD1-208ENST00000555806 SMC6Q96SB8 1091 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 DMRTA2Q96SC8 542 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 EBPLQ9BY08 206 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 TP63Q9H3D4 680 aaPredicted RBP16.95■□□□□ 0.3
NEDD1-208ENST00000555806 C12orf65Q9H3J6 166 aaKnown RBP16.95■□□□□ 0.3
NEDD1-208ENST00000555806 LDAHQ9H6V9 325 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 MAT2BQ9NZL9 334 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 HEY2Q9UBP5 337 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 LIPGQ9Y5X9 500 aa16.95■□□□□ 0.3
NEDD1-208ENST00000555806 CHCHD2Q9Y6H1 151 aaPredicted RBP16.95■□□□□ 0.3
NEDD1-208ENST00000555806 UBFD1O14562 309 aaKnown RBP16.94■□□□□ 0.3
NEDD1-208ENST00000555806 ADAM10O14672 748 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 TP53I11O14683 189 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 CPA3P15088 417 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 AGAP20933 346 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 TMED10P49755 219 aaKnown RBP16.94■□□□□ 0.3
NEDD1-208ENST00000555806 FBXW4P57775 412 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 RAE1P78406 368 aaKnown RBP16.94■□□□□ 0.3
NEDD1-208ENST00000555806 DUSP2Q05923 314 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 SLC10A1Q14973 349 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 EXOSC7Q15024 291 aaKnown RBP16.94■□□□□ 0.3
NEDD1-208ENST00000555806 RPS6KA2Q15349 733 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 ZNF630Q2M218 657 aaPredicted RBP16.94■□□□□ 0.3
NEDD1-208ENST00000555806 PRICKLE4Q2TBC4 344 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 FRMD7Q6ZUT3 714 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 PRR22Q8IZ63 422 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 PIAS4Q8N2W9 510 aaPredicted RBP16.94■□□□□ 0.3
NEDD1-208ENST00000555806 OR2W6PQ8NHA6 318 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 ADIPOR1Q96A54 375 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 CNRIP1Q96F85 164 aaPredicted RBP16.94■□□□□ 0.3
NEDD1-208ENST00000555806 DOHHQ9BU89 302 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 EXO5Q9H790 373 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 GIMAP4Q9NUV9 329 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 MID2Q9UJV3 735 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 CNOT11Q9UKZ1 510 aaKnown RBP16.94■□□□□ 0.3
NEDD1-208ENST00000555806 CFL2Q9Y281 166 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 NPFFR2Q9Y5X5 522 aa16.94■□□□□ 0.3
NEDD1-208ENST00000555806 NCOA6Q14686 2063 aaPredicted RBP16.93■□□□□ 0.3
NEDD1-208ENST00000555806 H3BQF6 201 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 CLDN14O95500 239 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 IGHG3P01860 377 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 CELA3AP09093 270 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 DRD2P14416 443 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 S1PR1P21453 382 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 GPX3P22352 226 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 MAN2A2P49641 1150 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 DNAJB13P59910 316 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 VSNL1P62760 191 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 MGAT2Q10469 447 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 MAP4K2Q12851 820 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 LTB4RQ15722 352 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 NNATQ16517 81 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 HYAL4Q2M3T9 481 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 TRILQ7L0X0 811 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 CDC26Q8NHZ8 85 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms