RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ABHD10Q9NUJ1 306 aa4.88□□□□□ -1.63
HOXB3-213ENST00000552000 SYBUQ9NX95 663 aa4.88□□□□□ -1.63
HOXB3-213ENST00000552000 CNIH4Q9P003 139 aa4.88□□□□□ -1.63
HOXB3-213ENST00000552000 COPS7AQ9UBW8 275 aa4.88□□□□□ -1.63
HOXB3-213ENST00000552000 PACSIN3Q9UKS6 424 aa4.88□□□□□ -1.63
HOXB3-213ENST00000552000 AMFRQ9UKV5 643 aa4.88□□□□□ -1.63
HOXB3-213ENST00000552000 CNOT11Q9UKZ1 510 aaKnown RBP4.88□□□□□ -1.63
HOXB3-213ENST00000552000 DHRS7Q9Y394 339 aa4.88□□□□□ -1.63
HOXB3-213ENST00000552000 CHCHD2Q9Y6H1 151 aaPredicted RBP4.88□□□□□ -1.63
HOXB3-213ENST00000552000 U3KQE9 123 aa4.88□□□□□ -1.63
HOXB3-213ENST00000552000 H0Y3Z8 333 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 CYR61O00622 381 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 SPRY1O43609 319 aaPredicted RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 CTNSO60931 367 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 LDB3O75112 727 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 RCBTB2O95199 551 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 PLAUP00749 431 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 HPNP05981 417 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 C8GP07360 202 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 CERS1P27544 350 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 HNRNPH1P31943 449 aaKnown RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 STIP1P31948 543 aaKnown RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 CD79BP40259 229 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 MSH2P43246 934 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 NPY2RP49146 381 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 PLA2G16P53816 162 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 NAGLUP54802 743 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 NAP1L1P55209 391 aaKnown RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 STXBP1P61764 594 aaKnown RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 OCRLQ01968 901 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 SP140Q13342 867 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 KLF1Q13351 362 aaPredicted RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 BBS9Q3SYG4 887 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 NHSL2Q5HYW2 709 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 FNDC7Q5VTL7 733 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 DUPD1Q68J44 220 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF470Q6ECI4 717 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 TMEM64Q6YI46 380 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF704Q6ZNC4 412 aaPredicted RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 CLEC17AQ6ZS10 378 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 TMPRSS11BQ86T26 416 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 KIAA1328Q86T90 577 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 YRDCQ86U90 279 aaKnown RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 DENND6AQ8IWF6 608 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 C9orf40Q8IXQ3 194 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 PALM2Q8IXS6 379 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 KLHDC8AQ8IYD2 350 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 OR56A3Q8NH54 315 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 NUBPLQ8TB37 319 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 ZPLD1Q8TCW7 415 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 EPS8L3Q8TE67 593 aaKnown RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 ZNF721Q8TF20 911 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 EEF1AKMT1Q8WVE0 214 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 KCNJ9Q92806 393 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 GAL3ST3Q96A11 431 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 SENP5Q96HI0 755 aaPredicted RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 EAF1Q96JC9 268 aaPredicted RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 QRFPRQ96P65 431 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 GNRHR2Q96P88 292 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 GAL3ST4Q96RP7 486 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 AIF1LQ9BQI0 150 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 NPLQ9BXD5 320 aaPredicted RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 BEX2Q9BXY8 128 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 PLA2G12AQ9BZM1 189 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 OPN3Q9H1Y3 402 aaPredicted RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 UBQLN3Q9H347 655 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 PELI2Q9HAT8 420 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 LRTM1Q9HBL6 345 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 INTS10Q9NVR2 710 aaKnown RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 ARL15Q9NXU5 204 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 PSD3Q9NYI0 1048 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 TRMT6Q9UJA5 497 aaKnown RBP4.87□□□□□ -1.63
HOXB3-213ENST00000552000 CDC42EP3Q9UKI2 254 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 LAMP3Q9UQV4 416 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 C15orf41Q9Y2V0 281 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 PCDHA13Q9Y5I0 950 aa4.87□□□□□ -1.63
HOXB3-213ENST00000552000 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 A0A1W2PNV4 684 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 SYNDIG1LA6NDD5 238 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 BTNL10A8MVZ5 291 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 GOLGA6L19H0YKK7 550 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 C16orf97H3BN30 126 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 HRKO00198 91 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 EIF3FO00303 357 aaPredicted RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 HS3ST1O14792 307 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 TMPRSS2O15393 492 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 GPRIN2O60269 458 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 TMCC2O75069 709 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 MFAP3LO75121 409 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 TNFSF13O75888 250 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 SIX3O95343 332 aaPredicted RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 GUCA1CO95843 209 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 MBD3O95983 291 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 IGKV3-11P04433 115 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 TPM3P06753 285 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 TPM1P09493 284 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 HIST1H2AGP0C0S8 130 aaPredicted RBP4.86□□□□□ -1.63
HOXB3-213ENST00000552000 ZSCAN5DPP0CG00 497 aa4.86□□□□□ -1.63
HOXB3-213ENST00000552000 COX7A2P14406 83 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms